Gene Franean1_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0320 
Symbol 
ID5668744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp384542 
End bp385531 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content75% 
IMG OID641239251 
Producthypothetical protein 
Protein accessionYP_001504692 
Protein GI158312184 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.249889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.222556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCAC GTTCGTCGGT ATCAGTCGTC GGAACCGACC CACTGAGCCA GGTTGCGGCG 
ATTCCCGGTG TCGACGAGGC CGCGACGGCA GCCCGCGCGG CCGTCGACGC GCTCCTTCGG
CATCGCATCC TGCGGCGCCG CAGTGCCGAG GTGACCGCCG AGGCATCGCT GCGGGCGGCC
CGCGCCTCGG CCGCGCTGGA GGGCCACGAC ATCGCGCTGG ACGCGCTGCG GGCCCGGCTG
GGCGAGACCG GCCGCGACAA CGACCAGCCC GCGGTCTCGG TCAGCCAGTC GGCCGACCCG
TGGGAACGCT CACTCGCCGT GACGCTGGGA GCGGTACGCC TCTACGCGGA GCTGGGCACG
CTCTCCTCCG CCTGGGAGCG CGCGCCGCGC CAGGCGCTGG CACGCATGCA CGTCCTCGCC
GGGCGCGGGC TGCTTCCCGA CGACGTGCTC GGCCGGCCGC GAACGGACGT CTCATGGTCG
CCGACCAGCA TCACCGGGGC CGCCGTCACG GACGTCGCGG GATCTCCGCC CGTGCCGGCG
ATGCCGGCGG CGGAGATGTC CCAGCGCCTG GACGGGCTCA CCGCGGTGCT GACCGTGCCG
ACCAGGGCTC CCGCGATCGT GGTCGCGGCG ATCACGCACG GTGAGCTGCT CGCGATCCAT
CCCTTCGGCG CGCTCGACGG GATCATCGCC CGGGCCGCCG CGCGCCTCGT CCTGGTCAGC
CGCGGCCTGG ACCCGAAGGC ACTGGTGGCA ACGGACGTCG GCCATCTCGA GCTCGACCGC
GACCGCACCG GCCCGGCGGG AGCGGCCGGC ACGGGTGCCG TAGTACCGGG TGTGGGTGTC
GGCACGGAGC CGGACTACCG TGCCGCGCTC GCCGCGTACG TCGCGGGCGG CGCCGAGGGT
GTCGGGGTCT GGGTGCGGCA CTGTGCCGGA GCCCTGGAGC TGGCGGCGCG GGAGTCCCTC
GCGGTGTGCG AGGCACTCTC CCGGGGCTGA
 
Protein sequence
MTARSSVSVV GTDPLSQVAA IPGVDEAATA ARAAVDALLR HRILRRRSAE VTAEASLRAA 
RASAALEGHD IALDALRARL GETGRDNDQP AVSVSQSADP WERSLAVTLG AVRLYAELGT
LSSAWERAPR QALARMHVLA GRGLLPDDVL GRPRTDVSWS PTSITGAAVT DVAGSPPVPA
MPAAEMSQRL DGLTAVLTVP TRAPAIVVAA ITHGELLAIH PFGALDGIIA RAAARLVLVS
RGLDPKALVA TDVGHLELDR DRTGPAGAAG TGAVVPGVGV GTEPDYRAAL AAYVAGGAEG
VGVWVRHCAG ALELAARESL AVCEALSRG