| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0319 |
|---|
| Symbol | |
|---|
| ID | 5668743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 382911 |
|---|
| End bp | 384383 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641239250 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001504691 |
|---|
| Protein GI | 158312183 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.25463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.252141 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCCG CGAAGCCCCT GACATCAGCA GACGAAAACC ATCGCCAGCG CCCCCTCGTC
GTCACCGACG CGCCCGACCT GCTGGACGAC CTGCTCCGGC TCGCGGCCGC GGCGGGAGCG
GCCGTCACGG TGGTGCCGAC GGCCAGAGCC GCGAGCCGGT ACTGGGCGAG CGCGCCGCTC
GTCGTCGTGG GCGCCGACCG CGCCGCCGCC TGCGTCGCCG CGGGCCTGCC GGAGCGGTCC
GACATCGTGC TCGTCGGCAC CGACGTCGAC GATCACCGCA CCTGGAACCT CGCCCTCCTG
ATCAACGCCG AGCACGTGAT CTTCCTACCC GAGGCCGAGA CCTGGCTGGT CAACCTGCTC
TCGCGCGCGG CTGACGCGGC GCGGCGGCGG TCGCGGACGG TGGGCGTCCT CGGCGGCCGG
GGCGGGGTCG GCTCGACGAC GCTGGCGGTG GCCCTCGCCC GGGCGGGGCT GCGGCGTGGC
GTCCGTTCGG TGCTGCTGGA GGTCGACCCG TTCGGCGGCA TCGCGGTGGG CGACGACAAG
CCGCCGACGG CCGGCCCGTC AGCGGCCACG ATGCCGTCGA CCGCGGCACC GCCGGCGGAC
CCACCCGGGG TCGGCCGGGG CCCGTTCACC ACCGCCCCTC GCGGCGCACG CCCGGTGCCG
CCGGGTGACC GGTCGCGGCG GCACCGTCCC GGCCCGCCCA GCGGGGCGCA CGGACGTCCC
GGCGGAGGCA CCGCGACCGG CGGGAGCCCA CGCGAGGCGC CCATCGCCAA CGAGGAGGAC
GGCTTCCTCG ACGGGCTGCT CGCGGGGCCG ACCATGACCG GCGGCGACCT GCCGGTGCTC
TCCTGGGACC GCGGGGCGAT CCCGGTGCTG CCGCCCGCGG CGGTCGGCGC CCTGTTCGCC
ACGGCGCGCG GGAGCGCCGA CCTGATCGTC GCGGACCTCC CCCGCTCGGC CGACCCGGCC
TGCGACGTCG GCCTGTTCCT CTGCGAGACG GTGCTCGTCG TCGTGACGAC GCAGCCGTGG
GCGACCGCCG CGGCGGCCCG GGTGATCGCA TACGCCGCTC GCACCTGCTC GGACGTCAGG
CTGGTCGTCC GGCTGCCGCC GTCCGGTCCC GGTGGCCGCG GCGAGCTCAT GCTGCCCGGT
GGGACGGACC TGTCCGGGCG TCCGGCGACG GCCGGAGCGG TCGCGGCCCG GCTGGGCCTC
CCCCTGGCCG GGGTGATCCA CGACGAGCCC GGGGCGAGCC CCGCCGCGCT CGCCGCCGAG
GGCCGGCGGC GGGAGGCGGA CGGCGAGGGA GACCGTCCGA CCACAGGTCG CACTTCGGGC
AAGCCGCGCT CAGATGCCAC AGACGGGACC ACGAAGCGGG GCGTCGTCGA CAACGCGGCG
ACCGGCTTGG AACCCCGAAT CGGCGCATCG ATCATCGAGT TCAGTGACCT CTTCATCGCG
GAACTCGGGT TGGACGGCGG AGCTCGGCGA TGA
|
|---|
| Protein sequence | MTPAKPLTSA DENHRQRPLV VTDAPDLLDD LLRLAAAAGA AVTVVPTARA ASRYWASAPL
VVVGADRAAA CVAAGLPERS DIVLVGTDVD DHRTWNLALL INAEHVIFLP EAETWLVNLL
SRAADAARRR SRTVGVLGGR GGVGSTTLAV ALARAGLRRG VRSVLLEVDP FGGIAVGDDK
PPTAGPSAAT MPSTAAPPAD PPGVGRGPFT TAPRGARPVP PGDRSRRHRP GPPSGAHGRP
GGGTATGGSP REAPIANEED GFLDGLLAGP TMTGGDLPVL SWDRGAIPVL PPAAVGALFA
TARGSADLIV ADLPRSADPA CDVGLFLCET VLVVVTTQPW ATAAAARVIA YAARTCSDVR
LVVRLPPSGP GGRGELMLPG GTDLSGRPAT AGAVAARLGL PLAGVIHDEP GASPAALAAE
GRRREADGEG DRPTTGRTSG KPRSDATDGT TKRGVVDNAA TGLEPRIGAS IIEFSDLFIA
ELGLDGGARR
|
|---|
| |