Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0305 |
Symbol | |
ID | 5668729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 360969 |
End bp | 362006 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641239236 |
Product | PSP1 domain-containing protein |
Protein accession | YP_001504677 |
Protein GI | 158312169 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.782798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.297701 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGATGA TGTGCGCGGT GTCCTTCTCC CGCCGGGGCC GGCTCTACTA CGCCGATCCG GGCCCGTACA GCCCGCGGGT CGGTGACCGG GTCCTGGTGC CCACCGACGA GGGGCCCGAG GTCGCCACCT GCGTGTGGGC GCCGCAATGG GTCAGCGAGG ACGTCGGCGG CCTGCCGGTC CTGGCCGGCC TCGCGGACGA GGATGACCTG CGCCGCGACG ACGCCGCCCG CCGACGCCGC GCCCAGGCCA GGGTCGCCGC CCGCCGGCTC GTCCGGGAGC ACGGCCTGCC GATGAAGGTG GTCGGCGTCG ACGTTGTTCC CGACAGCAAC GCCTTCACCG TCTACTTCAC CGCCGAGAAC CGGGTCGACT TCCGTGCCCT CGTGCGTGAT CTCAACCGGA CGCTTTCCGC CCGCGTACAG CTGCGGCAGC TCTCGGCCCG CGACAGCGCG AAACTCCAGG GCGGGATCGG CTCCTGCGGG CGGGACCTCT GCTGCTCCAC CTTCCTCACC GACTTCGAGC CGGTAAGCGT GCGGATGGCC AAGGACCAGA ACCTCTCGCT GAACCCGATG CGCATCAGTG GGGCGTGCGG CCGGCTGATG TGCTGCCTGC GCTACGAGCA TCCCCTCTAC GAGGAGTTCA CCGCCGCCGT CCCCGCGGTG GGCGCACGTG CGTCCACACC GGACGGGGAC GGCCGGGTCG TCGCGCACGA CGTGCCGCGC CAGCAGGTGA CGGTCGCCCT CGACGGCGGG GGCCGGCACG CCTGCTCCCG CGCGGACGTC TGCGGCTCAC GCAAGGCCTA CGAGGCCACC CATGCCGCCG GACCGGCAGC CCCGGCCGGC ACGGCGGAAG CAGCCGGCAT GGCAGGGCCA GCCGACATGG CAGGGCCAGC CGCCACGGCG GAACCAACTG GGACCGCGGA ACCAGCCGGG CCAGCGGGGA CGGCGGGCCC GGCGCCGGAC GGCGGCGAGG ACGGCTCCCC CGACACGGCC GGCGGGCGGT CCCACCGCCG CCGTTCCCGG CGGCGCACGG AGCACTGA
|
Protein sequence | MPMMCAVSFS RRGRLYYADP GPYSPRVGDR VLVPTDEGPE VATCVWAPQW VSEDVGGLPV LAGLADEDDL RRDDAARRRR AQARVAARRL VREHGLPMKV VGVDVVPDSN AFTVYFTAEN RVDFRALVRD LNRTLSARVQ LRQLSARDSA KLQGGIGSCG RDLCCSTFLT DFEPVSVRMA KDQNLSLNPM RISGACGRLM CCLRYEHPLY EEFTAAVPAV GARASTPDGD GRVVAHDVPR QQVTVALDGG GRHACSRADV CGSRKAYEAT HAAGPAAPAG TAEAAGMAGP ADMAGPAATA EPTGTAEPAG PAGTAGPAPD GGEDGSPDTA GGRSHRRRSR RRTEH
|
| |