| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0258 |
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| Symbol | |
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| ID | 5668683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 311560 |
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| End bp | 314049 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641239188 |
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| Product | hypothetical protein |
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| Protein accession | YP_001504631 |
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| Protein GI | 158312123 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.828361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACAGC TGTGGTGGCG GGGAGCGGGT CGTCCGCGGC TGTTCGGAGC ATTCGACAGC
GACCCCGGGC ATTTCTGCCT CACCTCGGCG GCTCGCGTCG CGATCGTCGC CCCCGCCCTG
CTCGCCCTCG TCTCCACGCT TGTCGGCGAT GTGCGGATGA GCCTGTTCGC CTGGTTCGGC
GCCTACGCGC TCCTCGAGTT CGTCGACTTC GACGGGCCCC GACCGGCCCG GCTCACCGCC
TACCTCACGC TCGCCACCAC CGGCGCCGGG ATGGTCGTCC TCGGCACGCT CGGCTCGCGC
TCGCCCTGGC TGGCGGCGTC GATGACCGCG GTTGTGGCCT TCGTTGTGAT GTTCTCCGGC
GTGCTGAACG CCAAGGTCGC CGTCGCCGGC CGATCCGCGT TGCTCGCCTT CGTGCTGCCT
GTGATGACAC CCGGCCCGAT CTCGGCGATA CCGGAACGGC TGGTCGGCTG GGGGCTGGCC
TCGGTCGCCT CGATCACCGC CGCGATGCTG CTCTGGCCGC GCCGCCCGCC GGACCGCCTG
CGCGCGGAGA CGGCGGACGT CTGCCACGCG CTCGCGACGG CCGTGAGCTG GCAGCCCCAG
GTACCGGACC CGCCGGCAGC GGTGTCGCGC GGTCCGGCGG CCGACGTGTC GCGGCGTCCA
GCGCCCGATC TCTGGCCGGC GCTGCGGCGG CTGCGGCGGC AGTTCGTCGC GACGGCCCAC
CGCCCGACCG GGGTCGGTGG CCGTGCGGCG GCGCTCGGCC ACCTGGTGGT GGACGTCAAC
TGGCTGGTGC CGTTCGCCCT TCCGTGGCCG GAGCGGGACC GGACCGCCCG CGCCTGCTTT
CCCGCGGAGG CCGCCGAGCT GCACGCCGCC GTCACGGCGA CGCTGCGCGC GGCGGCCACC
CGCATCGAAC CGTCCGACCA CGGTCGGCCC AGGCCCAGGC CCAGGCCCAG GGCCGATGGC
GGGGGTGGTG GGATGCGGGT CGGGGACGAT CGGCTCGGGA TCGCGCGACT CGAACGGTCC
GAGCGGGCGA TGCGGTCGGC GTTGCTGCGG CAGCTGCGGG AGCCGGCGCC CGCCTGCCCA
CCGGACCTCG CCGCGGCCGA GGCGTTCCGC CTGCGCCGGC TGGCCCGGGG GGCCAGGGAA
CTGGCGCTGA ACGTGCTGAG GGTGACCGGC CCCCTCCCGC CCCGCCCGCC GGCGAGTCCC
GTCCGGCGCG CCGTGGACGC GTTCCATCAC GCGCGCCGGC TGGTGCGCGA ACGGGGAACC
GCCGCGACCG ATCTCGCCGC CGGCTACGCC AGCCCGCGGT CGGTGTGGTT CCGCAACAGC
GTGCGCGGCT CCCTCGGCCT CACCACGGCG GTGATCATCG CCCAGGCCGC CGGGCTCCAG
CACGGCTTCT GGGTCGTGCT GGGGACCTTG TCCGTCCTGC GCTCGAACGC CATGGCCACC
GGTTCCGCAG CGGTACGCGC GCTCGCCGGC ACCGGAGTCG GCATCGTCGT GGGTGGCCTT
TTCGTGGTCG CCGTCGGCAC CCACACCGCC GTCCTGTGGG CGGTTCTCCC GCTCGCCGTG
CTGCTCGGGA GCTACTCCCG CCGCAGGTCG GGGTTCGTAC TGGGCCAGGC GGGCTTCACG
GTCTCCGTGC TCATGCTGTT CAACATCGTC GAACCCGCCG GCTGGCGGGT GGGCATAGTA
CGGATCCAGG ACGTCATGAT CGGGTTCGGG GTGAGCATCG TCGTCGGTGC CCTGCTGTGG
CCCCGCGGCG CGGTCGCCGT GATCCGGACC CGCGCCGAAT CCGCCTACCG AAGTGCGGTG
ACGTTCCTCG ATCTCGTCGT CCCGCACGCG CCGGGTGCCC CCGAGCATCC GGCCGTGGCA
CCGGCCGCCC GCGAGGCGAT CCGGGCCGGC CGCCTCCTCG ACGACGCCGT ACGCCAGTTC
CTCGCCGAGC AGCCGCCGGG CCGCTTCGAC GTCGACGCGC TGATGACGAT CGTCGCCGGC
GCGCTGCGTA TCCGGCGGAC GGCGCAGCTC CTGTGGAACG GGGACGTCCC CTGGCCGCCC
GATCTGACGC CCGATCTCCC ACGCGCGACC GGCGCCGGCC GCGCCGAGGC CACCGGCTTC
GCCGTCGCCC AAGGCATCCT CATCGAGGAC ATGCGGGACC TCTGCCGTTG GTACACCGCC
TACGCCACGG CCCTCGGCGC CGCGCGGCGG CCGCCCGAGC CCGAAGCCGG CTCCGGCCGG
GCCGCCACAG CCGGGCTGAT CATGATCCAC AGGGCTGCCC GCGCGCACCG CTGCCCCGAG
ATCCTCGCCG GTGCCGCGCT GACCTCCCGG GCCGCCTACC TGGACATCCT GCGCGACCTG
CAGCCCCGGC TGACGGCCGC GGCCACGGCG CTCGACCAGA CGTCCGACGG CGGCCGGGAC
CGCCCGCGCA AGCCGGTCGA TCAGGCGCCG GGGCCCCAGG GGTCGCGGCC GGCCCCGGAA
CGCTCGCGAG CCTTCATCCG AGCCTCGTAG
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| Protein sequence | MRQLWWRGAG RPRLFGAFDS DPGHFCLTSA ARVAIVAPAL LALVSTLVGD VRMSLFAWFG
AYALLEFVDF DGPRPARLTA YLTLATTGAG MVVLGTLGSR SPWLAASMTA VVAFVVMFSG
VLNAKVAVAG RSALLAFVLP VMTPGPISAI PERLVGWGLA SVASITAAML LWPRRPPDRL
RAETADVCHA LATAVSWQPQ VPDPPAAVSR GPAADVSRRP APDLWPALRR LRRQFVATAH
RPTGVGGRAA ALGHLVVDVN WLVPFALPWP ERDRTARACF PAEAAELHAA VTATLRAAAT
RIEPSDHGRP RPRPRPRADG GGGGMRVGDD RLGIARLERS ERAMRSALLR QLREPAPACP
PDLAAAEAFR LRRLARGARE LALNVLRVTG PLPPRPPASP VRRAVDAFHH ARRLVRERGT
AATDLAAGYA SPRSVWFRNS VRGSLGLTTA VIIAQAAGLQ HGFWVVLGTL SVLRSNAMAT
GSAAVRALAG TGVGIVVGGL FVVAVGTHTA VLWAVLPLAV LLGSYSRRRS GFVLGQAGFT
VSVLMLFNIV EPAGWRVGIV RIQDVMIGFG VSIVVGALLW PRGAVAVIRT RAESAYRSAV
TFLDLVVPHA PGAPEHPAVA PAAREAIRAG RLLDDAVRQF LAEQPPGRFD VDALMTIVAG
ALRIRRTAQL LWNGDVPWPP DLTPDLPRAT GAGRAEATGF AVAQGILIED MRDLCRWYTA
YATALGAARR PPEPEAGSGR AATAGLIMIH RAARAHRCPE ILAGAALTSR AAYLDILRDL
QPRLTAAATA LDQTSDGGRD RPRKPVDQAP GPQGSRPAPE RSRAFIRAS
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