| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0248 |
|---|
| Symbol | |
|---|
| ID | 5668673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 302323 |
|---|
| End bp | 303096 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641239178 |
|---|
| Product | globin |
|---|
| Protein accession | YP_001504621 |
|---|
| Protein GI | 158312113 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2346] Truncated hemoglobins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.552337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.72518 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGTTG AGTACATCCG ATACCGGATA CCGGAACACA GCACTGACGA GTTCGAGAAG
GCGTATTCGC GAGCCGCGGC GGTGCTCGAG CGGTCGCGGA ACTGCCTGTC GTTCGAGCTC
ACCCGCTGCG TCGAGACGAA CGTCCAGTAC ATCCTGCGCA TTCAGTGGGA TTCGGTCGCC
GGCCATCTGG ACGGCTTCCG GCGGAGCGCG GAGTTCCGTG AGTTCCTGGC GCAGATCGGG
TCGTACGTCG AACACATCGA GGAGATGCAG CACTATTCTC CCACGGCGGT CGCCGGGCGG
GGCGGGGGAG CACCCGAGCC GCCCACCCTT TACGAATGGG CCGGCGGCGC CGAGGCCTTC
GAGCGGCTCC TTACCCGTTT CTACGAGATC GTCGTCGAGG ACGACCTTCT CGCGCCGCTG
TTCGCGGGCA TGAATCCGGC GCACGCCCAC CACGTGGCGA TGTGGCTCGG CGAGGTTTTC
GGTGGCCCGG CCGAGTACAC CGAGAAACGC GGCGGGTACG AGAACATGCT CGCCCACCAC
GTCGGCAGGG CCATCACCGA GCCGCAGCGC CGACGGTGGG TTAGCCTGCT CGTCGACGCG
GCGGACGAGG TCGGGCTGCC GGGCGATCCC GAGTTCCGGG CGGCGTTCAT GGGCTATGTC
GAATGGGGCA CCCGCCTCGC CGTCGAGAAC TCCACGCCCG GCGCCACACC CATGCCGCAC
GCGCCGGTTC CGCGTTGGGG CTGGGGCGTC GCGCCGCCCT GGCAGCCATC CTGA
|
|---|
| Protein sequence | MIVEYIRYRI PEHSTDEFEK AYSRAAAVLE RSRNCLSFEL TRCVETNVQY ILRIQWDSVA
GHLDGFRRSA EFREFLAQIG SYVEHIEEMQ HYSPTAVAGR GGGAPEPPTL YEWAGGAEAF
ERLLTRFYEI VVEDDLLAPL FAGMNPAHAH HVAMWLGEVF GGPAEYTEKR GGYENMLAHH
VGRAITEPQR RRWVSLLVDA ADEVGLPGDP EFRAAFMGYV EWGTRLAVEN STPGATPMPH
APVPRWGWGV APPWQPS
|
|---|
| |