| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0187 |
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| Symbol | |
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| ID | 5668612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 227518 |
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| End bp | 229479 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641239116 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001504560 |
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| Protein GI | 158312052 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.228831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.390007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGGG CGGCGCGGCT CTACGCGACG CTGCTGTTCG GCCGGATGGG GCGGATCGGC
CGATGGCTGC GCCGCCACCT GCTCGGCACG TTCCTCGTGC TCGGGCTGAT CGCCCTCGTG
CTGAGCCTCA TCGGCTCGTA CCAGCACTTC TCCGCGGAGC CCGAGACGTT CACCTGGGCG
AACGTGATCT TCTTCGCCTC GACGCTCTTC CTCGCCGACG GCACGATGTT CGAGAACGGC
GGGCAGTTCC CCCCGGCGCT GGAGATCGCC CGTTTCCTCG CCCCGCTGGC GACGGCCGTC
GGTGTCGCCG ACGCCGCCAG CACCCTGTTC GCGCACCGGT TCGAACGGTT CCGCGCCCGG
CACGCGCACC GGCATGTCAT CGTCTGCGGC ACCGGGCCGA CCGCCTCCGC GCTCGTGGAC
AAGCTCGTCG GGAACAGCCG GGTCGTGCTC GTCGCCGAGG ACGCCGAGCG GGAGTATCCC
GACGCGGAGC GGCCCCCGAA CCTGCTGCGG GTCATCGGTG ACCCGGTGGA GCGGCTCGTC
CTGGCCAGCG CGGGGATCAT GCGGGCCGAC GTCGTCTACA GCTGCCTGGA CGACACCGCC
TCCAACCTCG CCGTCGCGCT CACCGCCCGT GGCGTCGTGC GGACCAGCCG GGCCGGCAGC
CGCCGGATCT CCTCCGCCCG GCTGGACCAT CCGCTGCGCT GCCTGGCCCA GGTGGGCGAC
CTCTCGCTGC TGCCGCACCT GCGGGCCCGC CGCATCGGCC TGGAGAACGA CCCTGGCTTC
CGCCTCGACT TCTTCGCGGT GGAGGTGCTC GGCGCGCACG CCATGCTGAA CGGCAACGCG
CCCGCCTGGG CCCGGCCGGA CGAGTTTCCC GACCTGCGGG CGCGCCCGGC GCCGGTCGTC
GTTCTCGGGC TGTCCGACCT GGGCCAGGCC GTGGTGATGG AGCTGGCGCG GCGCTGGCGC
GACTACAGCT CGCCCGGCTC GCCACCGCTG CGGATCGTCC TGTCGGGGCG GAACGCGACC
GTCGAGGCCG CGGCCATGCG CTCGCGGGAG CCGGCGCTGG CCCGGGTCGA GCTGTTGGCC
AACGACAGTC CGTCCGGGGA GCTGCCCGTG GCGGTCCTCG AGCTCGACGA CCCGGTCGAG
GGCGCCCGGA CCGTCCCGCC GGAGTTCGTC TACGTCTGCC ACGGCGACGA GGAGGAGGCG
CTGCTGCGCG GGCTGGAGGT GGCGCGCACG CTGGGCGCCG CCAGCCTCGG CGAGCATGGC
ACCCGGGTCG TCGTGCGCAC CGGCCGGCAG CGCAGCTTCG AGGACGTCTT CGGCCCGCGC
GAGGCGCCCG ACCCGGACGG CCCCGACGAC GACCCGGACG CGCCCGTCCC GCCGCCGCCC
GGCCCGGGGC GGCGTGGCGG CGGTGCGCTG CTGGACGACG TCCAGGGCGG GTTGCGGTTC
TTCGCGGTCA ACGACGAGGC GCTGCCCCTC GATCCCGGGG CGAACGACCT CATCGAGCGC
TTCGCGCGGA TCATCCACGA GAAGTACCTG TTCAAGGAGA TGACCGGCGG CGCGGTCCTG
CGTTCGCGGC GGAGCCTGCG CCCCTGGGAC GAGCTGGACG ACGATCTGCG GGCCGCCAAC
CTGGCGCAGG CGATCGGGTA CAGCGACGTC CTGCGCCGGC GGAACTGGAT GCTGATGCCG
GCCGGGGAGC ACGACCCGGA GTTCGTCTTC ACGCCGGAGG AGCTGGAGGA GCTCGCCCAG
GCGGAGCATG CCCGCTGGCG GCGCGAGCGG GAGAGCCGCG GGGTGCGGTA CGGGCCGGTG
GAGCGGGGCG GCTCCGATCC GCGTCACCCG TCCCTCGTCG ACTGGGAGCA GCTCTCCCCG
GCGGACCAGG ACCGCGACCG CGACGTGGTG CGCAATATGC CCCAGGTGCT GGCCACAGCC
GGCCTGCGCA TCGTGCGGAT GACACCGCGC CCACCCGACT GA
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| Protein sequence | MARAARLYAT LLFGRMGRIG RWLRRHLLGT FLVLGLIALV LSLIGSYQHF SAEPETFTWA
NVIFFASTLF LADGTMFENG GQFPPALEIA RFLAPLATAV GVADAASTLF AHRFERFRAR
HAHRHVIVCG TGPTASALVD KLVGNSRVVL VAEDAEREYP DAERPPNLLR VIGDPVERLV
LASAGIMRAD VVYSCLDDTA SNLAVALTAR GVVRTSRAGS RRISSARLDH PLRCLAQVGD
LSLLPHLRAR RIGLENDPGF RLDFFAVEVL GAHAMLNGNA PAWARPDEFP DLRARPAPVV
VLGLSDLGQA VVMELARRWR DYSSPGSPPL RIVLSGRNAT VEAAAMRSRE PALARVELLA
NDSPSGELPV AVLELDDPVE GARTVPPEFV YVCHGDEEEA LLRGLEVART LGAASLGEHG
TRVVVRTGRQ RSFEDVFGPR EAPDPDGPDD DPDAPVPPPP GPGRRGGGAL LDDVQGGLRF
FAVNDEALPL DPGANDLIER FARIIHEKYL FKEMTGGAVL RSRRSLRPWD ELDDDLRAAN
LAQAIGYSDV LRRRNWMLMP AGEHDPEFVF TPEELEELAQ AEHARWRRER ESRGVRYGPV
ERGGSDPRHP SLVDWEQLSP ADQDRDRDVV RNMPQVLATA GLRIVRMTPR PPD
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