| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0152 |
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| Symbol | |
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| ID | 5668577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 179868 |
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| End bp | 180809 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641239081 |
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| Product | hypothetical protein |
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| Protein accession | YP_001504525 |
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| Protein GI | 158312017 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR03664] futalosine nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00531151 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCGCA CCCTCATCGT CACCGCGGTG AACGCCGAGG CGGACGCGGT GTGCGCCGGT
CTGATGGGGA GTTGGTCGCG CGGTCGCTCG CGCACTCCGT CCGGGCCCGG CGGCCTGGTC
TCGCCCGACT GGGACCGGCA GTTGCTGACC ACCTCGACCC TCGGGCCCTA TGTCGGGCGC
CGGCGCGGTC CGGTGACCGT TCTCGCCGCC GGCCCGGCTG GTCCGGCGTC CGCGGCCGGG
ACGGCCGTCG CCCTGGCGGT CGCGAGCGCG GCCGGCGAGC CGTTCGGGCT GGTCATCTCG
ATGGGGATCG CGGGCGGTTT CCGCGGCTGG GCTGAGGTCG GCGACCTGGT GATCGCCGAT
CGGATGGTCG CCGCGGACCT CGGCGCCGAG TCCGGACTCG ACGAGCCGGC CGAGCCGGCA
GCCCCGGTCC GGATCAACGA GATGGACCGC AACCTGGGCT TCCACCCCGC CGGGGCACCC
CCGTACCAGC CCGGCCCGCC GCCGGGCCCG GTGGCGGCGG GCGCGTTCCT GACCATGGAC
GACCTGGGCC TCGGCTCGTC GACCCTGCAG CCCGACGCCG ACCTCGTCCG GCGGCTGACG
ACCGTTCTCG ACATCACCGG GCGCAGAATC GTGAGTGGCA CCGTCCTCAC TGTGTCGACC
GTGACCGGGA CGGAGCGGCG GGCCGCGGCG CTCACAGCAC GGCTGGACCC GGTCGCCGAG
GCGATGGAGG GGTACGCCGT CGGGATTGCC GCGGGCGCGT TCGGTGTTCC GGTGACGGAG
ATCCGCGCGG TCAGCAACCC GGTCGGCCGG CGAGACCGCG CGGCGTGGAA CACGCAGGCC
GCGCTGGGCA GCCTGCGCAC CGCGGCGGCG GCGCTCGTGG CACACCCGGA GGGCCTGGTA
CCCGCCCCCC GCGCGGAGAA GGAGTCGGGG CCGACGGGCT AG
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| Protein sequence | MTRTLIVTAV NAEADAVCAG LMGSWSRGRS RTPSGPGGLV SPDWDRQLLT TSTLGPYVGR
RRGPVTVLAA GPAGPASAAG TAVALAVASA AGEPFGLVIS MGIAGGFRGW AEVGDLVIAD
RMVAADLGAE SGLDEPAEPA APVRINEMDR NLGFHPAGAP PYQPGPPPGP VAAGAFLTMD
DLGLGSSTLQ PDADLVRRLT TVLDITGRRI VSGTVLTVST VTGTERRAAA LTARLDPVAE
AMEGYAVGIA AGAFGVPVTE IRAVSNPVGR RDRAAWNTQA ALGSLRTAAA ALVAHPEGLV
PAPRAEKESG PTG
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