Gene Franean1_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0115 
Symbol 
ID5668540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp136246 
End bp137430 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content72% 
IMG OID641239043 
Producthypothetical protein 
Protein accessionYP_001504488 
Protein GI158311980 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGCA TTCCGTTTCC TTCGCACGGG CGGGCCGGGT CCGCGACCGG GTCTGTCACG 
GTCGGCTCGG GGAGCGCCGG GTGGCGGGCG ACCCGCACCG GTCGCGTGGC GGCCACGACG
CTCTTCTTCG TCGGCCAGGT GCTGCTGCTC GCCGCGCTTT ACATGATCTA TCGCATGGGG
CGGCAGATGG CCGTCGGCCG GGAGCCCGAG GCGCTGGCCA ACGCGCGGGA CGTCTGGAGC
CTGGAACGCC TGCTCGACCT GCCCAACGAG TCCGCGGTCC AGCAACTCGC GCTGCACTCC
ACGGAGCTGC TGGAGCTGGC GAACCGCTTC TACATCGGGG TCCACTTCCC GGCGTCGATC
GCGTTCCTGC TGTGGGTGAT GATCCGCCAC CGGGACCACT GGCCCCGGGT GCGCACGGTG
ATCCTTGTGT CGACCGGCGC CGCGCTCATG ATCCACATTC TGTACCCGCT GGCGCCGCCC
CGGTTCCTGC CGCAGGAGCT GCCGCACGTC ACCCTCGTCG ACACCGGCGC GGTCTTCGGG
CCGTCCCCGT ACACCGCCGG TGACACGGTG GCCAACCAGT ACGCGGCCAT GCCGAGCCTG
CACGTCGGCT GGTCGATCCT GGTCGCCTGG GGAGTGGTGA GCATCCTGCG CTCACGCGCG
CGGTGGCTCA TCATCGCGCA CCCGGTGATC ACAACCGTCG TCGTCGTGAT CACCGGGAAC
CACTACTGGC TGGACGGCGT GATCGGCGGC AGCCTGGTGG CCACGGCGGT TCAGCTCACC
CGGCTCGAGG CGCACGCCCG GATGCGACTG TGGACCATCG CCGCCGGCCA GCGGCTGTGG
GGACGGGCTG GTGAGGCCAC CGCGTCGCTT GCCGGCTCGC CGTCCGGAGC CCTCGGTGGC
GTGGGTGTCG GCGCGGGTGT CGGGAACACG ACTGATGCGG ATCCGCGGAC TGGAACAGAC
CACGGGACGG GTACGGACCA CCCGGTGAGC GTGCCCTCCT CCGTGGTCTT CGCGGCGGTG
CTTCCCGCCG CGCGCGGCGG GCCTCCCCGC GCTGACCTGC CCGCACAGCG TCCGTTCCCA
CCGGGCCCGC TCCCATCGGG CGGCACCGAG CCGGAGGACC GTCCGCCCAC GGCGGCGCGG
GCCGACGTCG CCGCGGTGGA ATCCGCCGAC GGCGAGAGCG GCTGA
 
Protein sequence
MVSIPFPSHG RAGSATGSVT VGSGSAGWRA TRTGRVAATT LFFVGQVLLL AALYMIYRMG 
RQMAVGREPE ALANARDVWS LERLLDLPNE SAVQQLALHS TELLELANRF YIGVHFPASI
AFLLWVMIRH RDHWPRVRTV ILVSTGAALM IHILYPLAPP RFLPQELPHV TLVDTGAVFG
PSPYTAGDTV ANQYAAMPSL HVGWSILVAW GVVSILRSRA RWLIIAHPVI TTVVVVITGN
HYWLDGVIGG SLVATAVQLT RLEAHARMRL WTIAAGQRLW GRAGEATASL AGSPSGALGG
VGVGAGVGNT TDADPRTGTD HGTGTDHPVS VPSSVVFAAV LPAARGGPPR ADLPAQRPFP
PGPLPSGGTE PEDRPPTAAR ADVAAVESAD GESG