| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0113 |
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| Symbol | |
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| ID | 5668538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 132262 |
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| End bp | 134859 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641239041 |
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| Product | MMPL domain-containing protein |
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| Protein accession | YP_001504486 |
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| Protein GI | 158311978 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR00921] The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.382745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCT CGCCAGCGCC GTCCGACCCG TCCGCCCCAT CTGGTGGGTC GGCGCGATTC
TGGTCGGGCC TCGGACGCAC GGTCGGCCGC CGGACGGGCA TGGTGGCCGT GGTGGCCTTG
ATCATCACCG CGGTGCTCGG TCTCGGCCTG ACCAAGCTGG AGTTCACCAC CGGCCAGGAC
AACTATCTCA ATTCCGACTC GCAGGTCGCC AAGGACAACG TCGCCTACCA GAACCTCTTC
GGCGGCCAGG CGATGATCGT CCTGTTCACC ACGAAGCCTG GTACGGATCT CGTCGACCTC
TTCACCACCG ACAATGTCAA GAAGTTCCGC GATCTCTCCG CGCGGCTGGA GAAGGACCCG
CGCATCGAGA GCGTGATCAC CCCGCTCACC GCGCTGCAGT TCACCGCGAA CCTGGTCACC
AGCCCGGACG GGAATCCGAT CAGCAGCCCG GCGGGGCAGA TCCTGCTCGA CGCCCAGAGC
CGCGATCCGA ATCCGGACTC CGCAAAGCGG CGGCTTGCCG ACTCGCTGCG CACCCTGGAA
CGAATCAACG CGATACCCGC GGATCGGCGT GACTTCGACG ATCCCGACTG GACGGACTTC
CTGCTGCACG ACAACACCGG TGCCGTCCGC AAGTCGCTCG AGTCGTTCTT CCCGACCGAC
CGGACGGCGC AGATGATCGT CCGGTTGAAG GGGAACGCGT CCATCAAGGA AGAGGGCCGC
GGAGCGTCCG CCACCGAGGC CGCGATGCAG GACCTGACCT TCGACAACGC CGACGTCATG
ACGACCGGCG CCGCCGTGCT GCTCCGTGAC ATCAACGACT ACCTGCGCGG CGGCTTCCTC
ACGCTCGGAG CCATCTCGCT GGTCATCATG GCCGGGCTGC TGCTGGTCGC CTTCGCCGTG
CGCTGGCGGC TGCTGCCACT CGGCGTGGTG GCGGTCGGCC TCGTCTGGGC GTTCGGGCTC
GCGGGCTATC TGGGCGTGCC GCTGTCCGTC GTGACCATCG CCGGCATGCC CGTCCTGCTC
GGGGTCGGCA TCGACTTCGC GGTCCAGCTG CACAGCAGGG TCGAGGAGGA GGCACAGCTC
GACCGGGCCC GCGATCCCGT CGCCGAGGCG CTGGCCTGGC TGATGCCGGC CCTGGCGGTG
GCCACCGTCG CCGGAATCGT CGCGTTCCTC GCGCTGGAGT TCAGCGAGGT GCCGATGATC
CGCGACTTCG GCGTCCTGCT CGCGATCGGC CTGCCGGTCA TCGTCGTCGC GACCGTGCTG
CTGAGCGCCG CCTCGCTCGG GTTCCGGGAG CGCCGCTCCC CCACCGCGCC GAGGGACTAC
TCACGAGGCC CGCTCGGACG CGCGGTGGTC GCACTCGGCT CGCTACCTCG GGTGACCGCC
ATCCCACTCG TCGTGCTCGC GGCCGCGATC TTCGCCGGTG GGCTGGTCGT CGAGGGCGAC
CTGAAGGTCC AGACCGACCC GGAGAAGTGG GTGAGCCAGG ACTCCCAGGT CGTGCACGAC
ATCCAGAACC TCAAGGCGCA GACGGGGTCC AGCAGCGAGC TGGGCGTCTA CATCCAGTCC
GGTGACGTCT TCGACGACAG GACGGTGAAG TTCGTCCACG ACTTCACCTA CCAGCAGCTC
AAGGAGCACC CCCAGGAACT GCTGACGGCG TCCAGCCTGG TGACGACGAT CAGCTTTCTC
ATGGAGGTGC CCGACACCAC GCTCCTCGCC CCGACCGGCG CGGACATCGA GCGGGCCTAC
CGGGTCACGC CGGAAGCGAT CCAGAAGAGC ACGGTCAACC TGGACGGCAA GGCACTCAAC
CTGATCTTCC GGACCGGGCC GGGCGCGCTG GAGGAACGCG CGGTCGTCGT CGACGACATC
CGGGCGACGG TCAGCCCGCC CGAGGGGATC CGCGCGACGC CGTCCGGCCT GGCCGTCGTC
GGCACCGGCC TGCTGGAGAA CTTCGAGAAG AACCGCGTCG AGCTGACATA CTTCGCGCTC
ATCGGCGTGT TCCTGATCCT GCTGCTGTGG CACCGGAACA TCGTCCGCGC GGTGGTGTCG
GTGGTACCCG TGCTGATCGC GGTGGGGCTC ACCGCGATCG TCTCCTGGCT CGCCGGCTTC
GACCTCAGCC CGCTAACGGC GGTCGGCGGG CCACTCGTGA TCGCGCTGTG CACGGAGTTC
ACGACACTGA TCGTCATGCG GCATATCGAG GAGCGCCGCC GCGGGCGCGA CCCGCTGGCC
GCCATCGAGG AGGCGGCGGC CCGCACCGGG CGTGCCTTCA TGGTGTCCGC GCTCGCCGCG
GTGATCGGGA TCGTGGTCCT GGCGTTCAGC TCGTTGCCGC TGCTGCGCGA CTTCGGCCTG
GTGGTGGCCC TGAACGTGGG CGTCGCCCTG CTCTCCGCGC TCGTAGTGCT GCCGCCGCTG
CTGCTGTGGG CGGACGAGCG CGGCTGGGTC TACCGCGGCC CGCGGCTCGC GGCCGGCGCG
CTTCCGCTGC CCACCCCGGC CCCCGCCGGC GCCGGGGTGG GCGGGCCAGC CGGGTCGGAC
GGCACCTCGG CACCGCCCGC CGGGAGCGCG ACCCCGCCCG CCGCGGGGAG CTCGGCCGGG
CCCACCCCCG AGAGCTGA
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| Protein sequence | MPSSPAPSDP SAPSGGSARF WSGLGRTVGR RTGMVAVVAL IITAVLGLGL TKLEFTTGQD
NYLNSDSQVA KDNVAYQNLF GGQAMIVLFT TKPGTDLVDL FTTDNVKKFR DLSARLEKDP
RIESVITPLT ALQFTANLVT SPDGNPISSP AGQILLDAQS RDPNPDSAKR RLADSLRTLE
RINAIPADRR DFDDPDWTDF LLHDNTGAVR KSLESFFPTD RTAQMIVRLK GNASIKEEGR
GASATEAAMQ DLTFDNADVM TTGAAVLLRD INDYLRGGFL TLGAISLVIM AGLLLVAFAV
RWRLLPLGVV AVGLVWAFGL AGYLGVPLSV VTIAGMPVLL GVGIDFAVQL HSRVEEEAQL
DRARDPVAEA LAWLMPALAV ATVAGIVAFL ALEFSEVPMI RDFGVLLAIG LPVIVVATVL
LSAASLGFRE RRSPTAPRDY SRGPLGRAVV ALGSLPRVTA IPLVVLAAAI FAGGLVVEGD
LKVQTDPEKW VSQDSQVVHD IQNLKAQTGS SSELGVYIQS GDVFDDRTVK FVHDFTYQQL
KEHPQELLTA SSLVTTISFL MEVPDTTLLA PTGADIERAY RVTPEAIQKS TVNLDGKALN
LIFRTGPGAL EERAVVVDDI RATVSPPEGI RATPSGLAVV GTGLLENFEK NRVELTYFAL
IGVFLILLLW HRNIVRAVVS VVPVLIAVGL TAIVSWLAGF DLSPLTAVGG PLVIALCTEF
TTLIVMRHIE ERRRGRDPLA AIEEAAARTG RAFMVSALAA VIGIVVLAFS SLPLLRDFGL
VVALNVGVAL LSALVVLPPL LLWADERGWV YRGPRLAAGA LPLPTPAPAG AGVGGPAGSD
GTSAPPAGSA TPPAAGSSAG PTPES
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