| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0072 |
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| Symbol | |
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| ID | 5668497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 86789 |
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| End bp | 89791 |
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| Gene Length | 3003 bp |
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| Protein Length | 1000 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641239000 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001504445 |
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| Protein GI | 158311937 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.996458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCC TGCGCAGCGT CAACCGCTCG GCGACGGAGG CGGCCCGGCG GTTGCGCCGG
ATCGAAGCGC AGGACGCCGA CCCGGGACCG GCCCCGGTGT CCGGCCTGAG GCCGGGGCCG
CGATCCGGCC CGGCGGCCGG CGCCCTACGT GACGCCCTGC TGGTGGACGG CGGGCGGGCG
TCGTTCGTGG GGCGGCCGGA GGCGTTGCTT CAGCTGCGCC GGGCGGTCGC CGATGTCCTC
GGCGGGCGGC CGCGGGTCGC GCTGCTGGAG GGCCCGGCGG GAATCGGCAA GACGGCTCTG
GCCCGTCATC TCCTCGGCGA GGCGGATGCC GGCTGCGTGC TGTGGGCGAG CGGCGAGGAG
GACGAGACGG GTCTCAGCTT CGGGGTGCTC GACCAGCTGA CCGCCGAGGC GGCCCGGGTA
CTCGGAGCGG ACCAGCCCTC CCCGAGCGGT CCGGGTGAGC TGACCGGCAC CGCGGGATCC
GTCCGCGGCC CGTCACCCGA TCCGCTGGTC GCCGGCGCGG CTCTGGTCGA ACTGCTCGGC
GAGCTGCAGC GGTCCGGCCC GGTCGTGCTG GTCGTCGACG ACGCGCACTG GGCGGATCGG
CCGTCCCTGC AGGCGCTGAC GTTCGCGCTG CGGCGGTTGC GGGCCGACCG GGTGCTCGCC
CTGGTGATGG TCCGGGATCT GGTGGACGCG CAGCTTCCGG ACGGGCTGCG CCGGCTGCTG
ATGGACGAGC GGACCGTCCG TCTCCTGCTC GAGGGGTTGG ACGACACCGA GCTGCGGGCC
CTGAGCTCCG CGCACGCCAC CGGGCCGCTG TCCTGGCGAG CCTGCGCCCG CCTGCGAGCC
CACACAGGCG GCAATCCACT GCACGCCCGT GCGCTGCTCG AGGAGGTCCC GACGGAGGCC
TTCGACAATC TCGACGTGCC GCTGCCGGTG CCGCGCTCGT TTGCGATGCT CGTCGTGGCG
AGGCTTGCGG CAGCACCGGT CCAGGGCCGG GAGCTGGCGA CCGCGGCCAG CGTCCTCGGC
GCGCATCCCA CCCTGGTCCA GGCTGCAGCG GTCGGCGGGG TGGACGAGCC GCTGTCTGCC
CTGGAGCAGG CGATCGCGGC GGGCCTGCTG GTGGAGCAGC CGGTCGCGTG GGGTCTTCGG
TTCCCGCATC CGCTGGTGCA CGCCGCGATC TACGAGCAGG CCGGCCCGGC GCGGCGCGCC
GAGCTGCACA CCCGTGCGGC GGCTCTCGCC GAGGAGGAGG CCCTGCGACT GCACCATCTG
GCCCGTGCCG CCACCGGGCC GGACGGCGGG CTGGCAATGG AGCTGGCCAG GCAGGGCCGG
GAGCAGGCGA CCGCGGGGGC GTGGGCCGCC GCCGCGAACC ATTTGTCCAC CGCCGCCCGG
CTCGCCCCGT CGCGCACCGA CTACGAGCAG CTGACGTTGG AGGCGGCGGA CTGCCAGCTG
CTGGCGGGTG ATGTGCCTGA TCCTCTCGGG AAGGTCGGTG AGGTTCGCGG TTTCCGCCCG
ACCGCCTGGC GTGACTACCT GCTGGGCCGC TTCGCCTTCC AGCGCGGTGA CGCGGACGAG
GCCGAGACAC GGCTGCGGAG CGCCTGGAAG CGCTGCGACC CGGACGGTGG TGCCGACGCC
GACCCGCTGC TCGGTGCTCG GGTCGCCGGC TGGCTCGCTG CTCTTTACCA GACGAAGCTC
CTCGGCGCGG AGTCCGCCGA GTGGGCCGGG CGGGCGCTGG CGTTGAGCCC CGGCCACGCG
GCGTTCGACC TCATCGGGCA GATCCGGATG GGCGGGCTGG CGATGAGCGG GCATCTCGAC
GCCGTCCTCG ATTCGGTCGC CGACCTGCCG GACCCCGCCG TGGCCTCCAT GACTGACCTG
GACATGCTCG CGGGCAGGGG ATCCCTGCAC GCTCTGGTCG ATGATTTCGC CGGCGCGCGC
CGGGACCTCG GCGGGGTCCT GGCCGCCGGC CGGGACCGCT CGCTCCTTTT CCGGGTGTCG
GTCACCACCG CGCTCGCCCA GGCCGAGTAC CGGGCGGGGC TCTGGGACGA TGCCGCGATC
CACTGCGATC ACGCGTTGTC GCTGATGGCC GACTCCGACG ACGGCGCTCT CGTCCCGTAC
TGCCATCAGG TCGGCGTCCT GGTACCCGCG GCTCGTGGCC ATTGGGTGGA GGCCGAGGAA
CACGTCCGGA CGACGCAGGC CTTCGCCGAA AGCGGGTTTC CGTATCTCGT CGCGAGCGCG
GCCATCGCCA CGGCCCACCT GGCACGGGCC CGTGGCCTAC CCGCCGAGAT CGTCGCGGCC
CTCGAACCGC CGGTCCGGTC CGGGCTGCTG GACCTTGATG CCGAGCCTGG AGTCTCTGGG
TGGCAGGACA CCCTTGTCGA CGCTCTGGTG GAGGTCGGTG ACCTCGGACG GGCCGAGGAG
GTGCTGATCC GGTTCGAGGC GGCAGCCAGA CTGCGTGGGC GCCGCGCTGC AATGGCCGCC
GCCGCCCGCA GCCGCGGCAA CCTGGAAGCA CGCCGGGACA ACGTGAGCGC AGCCGACAGG
GCCTTTCGCG CGGGCCTCGC CGAATGGGAA CACGTCGACC TGCCGTTCGA GCGGGCGCTG
CTCCATCACC TCTACGGTGC CTTCCTGCGC AGGGCCGGCC GGCCCGCCGA CGCCATCAGG
CAGCTCAGAG CCGCCCACGA CACCCTCAGC CTGCTGGACG CCCGCCCCTA CCTGGACCGC
TGCGAGAGCG AACTCGTCGC CGGCGGATGG GCACCTCGGG ACGGCTGCCG CCGGGAACCG
GACGCATCCC GCCTGACCAC CCCGGAGCTT GCCGTCGCCA AGCTGGTCGC CGCGGGTCTC
ACCAACCGTC AGGTCGCCCG GGAGCTCGTC CTCAGCGAGA AGACCGTCGA ACACCATCTA
CGTGCCGTCT TCGGGAAGCT GGATGTGACG GCGCGAACCC AGCTGTCTGG CAGGATCTTC
GCCGCGGCCG GAGGCCTCGC CCAGTGGAAT GGTGCCGACA GGGTGCTTCT CCGGTCCGAG
TGA
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| Protein sequence | MAGLRSVNRS ATEAARRLRR IEAQDADPGP APVSGLRPGP RSGPAAGALR DALLVDGGRA
SFVGRPEALL QLRRAVADVL GGRPRVALLE GPAGIGKTAL ARHLLGEADA GCVLWASGEE
DETGLSFGVL DQLTAEAARV LGADQPSPSG PGELTGTAGS VRGPSPDPLV AGAALVELLG
ELQRSGPVVL VVDDAHWADR PSLQALTFAL RRLRADRVLA LVMVRDLVDA QLPDGLRRLL
MDERTVRLLL EGLDDTELRA LSSAHATGPL SWRACARLRA HTGGNPLHAR ALLEEVPTEA
FDNLDVPLPV PRSFAMLVVA RLAAAPVQGR ELATAASVLG AHPTLVQAAA VGGVDEPLSA
LEQAIAAGLL VEQPVAWGLR FPHPLVHAAI YEQAGPARRA ELHTRAAALA EEEALRLHHL
ARAATGPDGG LAMELARQGR EQATAGAWAA AANHLSTAAR LAPSRTDYEQ LTLEAADCQL
LAGDVPDPLG KVGEVRGFRP TAWRDYLLGR FAFQRGDADE AETRLRSAWK RCDPDGGADA
DPLLGARVAG WLAALYQTKL LGAESAEWAG RALALSPGHA AFDLIGQIRM GGLAMSGHLD
AVLDSVADLP DPAVASMTDL DMLAGRGSLH ALVDDFAGAR RDLGGVLAAG RDRSLLFRVS
VTTALAQAEY RAGLWDDAAI HCDHALSLMA DSDDGALVPY CHQVGVLVPA ARGHWVEAEE
HVRTTQAFAE SGFPYLVASA AIATAHLARA RGLPAEIVAA LEPPVRSGLL DLDAEPGVSG
WQDTLVDALV EVGDLGRAEE VLIRFEAAAR LRGRRAAMAA AARSRGNLEA RRDNVSAADR
AFRAGLAEWE HVDLPFERAL LHHLYGAFLR RAGRPADAIR QLRAAHDTLS LLDARPYLDR
CESELVAGGW APRDGCRREP DASRLTTPEL AVAKLVAAGL TNRQVARELV LSEKTVEHHL
RAVFGKLDVT ARTQLSGRIF AAAGGLAQWN GADRVLLRSE
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