Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0062 |
Symbol | |
ID | 5668488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 77817 |
End bp | 79001 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641238991 |
Product | hypothetical protein |
Protein accession | YP_001504436 |
Protein GI | 158311928 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGATC CGCGGCAACT GCGCCTGCTG AGCCTCCCCG CCCCTGCGTC TGGCTCGGTG GCTTCGCTGG CGGTGATCGC GGCGGAGTTC GATCCGGCCC GGCTCGCGCA GGCGCGCCGG CTGGCGGGTC TGACGAAGAG GGCCGTCGCC GGGCAGCTGG GAGTCTCCCC GGTTGCGGTA GGCCAGTGGG AAGCTGGAAC CCACGCGCCG CGCCCGGACC ACGTCGGCCG GCTCGCCGAG GTGCTCGACG TGCCGCCCGC CTTCCTCGCC GCCGGTCGCC CTTACGCCCG GCTGGAGAGT TCGGCGGCGC ACTTCCGGAG CCTGCGCCGA ACCCCGGTGA GCCAGCGCAA CAAGGCGATC GCCTTCACTG AACAGGTGTG GGAACTGACC TACGCTCTGG AGAAGCGGGT CCAGCTACCC CCTGTCGACC TGCCCGGCTT CTCCGCGGGA GAAGTCGTCA CCGACGTCGC CGGGACCGAT CCGGCCGGAG CCGCGCGGGC ACTTCGACAG GCGTGGAACC TGGGCACCGG ACCGATCCCG CACCTCGTCC GGACGATGGA GAACCACGGC CTGATCGTCA CCCTCGTCCC GTTCGCCGGC ACCGCGACGG CTACCGTCGA CGCCTTCTCC ACTTCCCACC TGCCCCGCCC CGTCGTTGTC CTCACCCCGG ACCGTGCCAA CGACGTCTAT CGTCATCGGT TCACTGCAGC GCACGAGCTT GGCCATCTCC TCCTGCATCC GGACACCGCA CCCGGCGACG CCATCCAGGA GAAGGAAGCC GACGCGTTCG CCGCTGAACT CCTCACCCCG AGCGCGGAGA TCACACCGCA ACTGCCCGCG CGCGTCGACC TGCACGCTCT CGACCAGCTC AGCAAGCAGT GGGGTGTGTC TGTCGACTCT CTGGTCTATC GGTGTCGGGA AGTCGGCGCA GTCTCGGATG CGGCCTATCG GCGTGCCTAC CAGCGCCTCA ACCAACTCCG GCAACTCGGA CTCTTCGCCC GCGAGCCGGT CGACGGATAC CGCGGCGAGG TACCGATCCT CCTCAATCGC GCCTACGCCC TCGCCGAAGA GCACGGCCTC ACCCTGGCCA CCCTCGCAAG AGAACTCGCC TGCACCCTTC CCCGCCTCCG GCTGCTTCTC GGCCATGCCG ACACGGACAC CCGACCACAG CTTCGCCTCG TCTAG
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Protein sequence | MDDPRQLRLL SLPAPASGSV ASLAVIAAEF DPARLAQARR LAGLTKRAVA GQLGVSPVAV GQWEAGTHAP RPDHVGRLAE VLDVPPAFLA AGRPYARLES SAAHFRSLRR TPVSQRNKAI AFTEQVWELT YALEKRVQLP PVDLPGFSAG EVVTDVAGTD PAGAARALRQ AWNLGTGPIP HLVRTMENHG LIVTLVPFAG TATATVDAFS TSHLPRPVVV LTPDRANDVY RHRFTAAHEL GHLLLHPDTA PGDAIQEKEA DAFAAELLTP SAEITPQLPA RVDLHALDQL SKQWGVSVDS LVYRCREVGA VSDAAYRRAY QRLNQLRQLG LFAREPVDGY RGEVPILLNR AYALAEEHGL TLATLARELA CTLPRLRLLL GHADTDTRPQ LRLV
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