Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0014 |
Symbol | |
ID | 5668441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 20169 |
End bp | 20873 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641238943 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001504389 |
Protein GI | 158311881 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.730336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCCG ATGACCCGGC CGCGGAGTGT GTGCGGCCAC GTCGGGGCCG TCCTCGCGAC GCGACGATCG ACGACCGTGT GCTGCGGGCC GCCGTCGACG AACTGGCTGG TCGCGGCGTC GGCGGGTTCA GCGTCAACAG CGTCGCCGCC CGCGCGGGCG TGGCGAAGCG GGGCATCTAC ACCCGGTGGG CGACCAGGGA CGATCTCGTC CTCGCCGCAC TGGGCACGCT GGCCGCCGGC CTCGTGCCGC CGCGCACCGG ATCCCTGCGC GAGGATCTCC TACGACTGGC ACCTCTGGTG GACGCCGTCT TCACCGAGCC GCGGATGTCG ATCCTCGCCC GATGCCTGGC CGAGCTGCCC CGGTACCCCG GGCTGTACGA GGCGTTCCGG CGGGAGTCGG TCGACCGCTG CGCGGCCGCC GTGCAGGACG CGTTCCACGA CGCGCGGCGG CGCGGAGAGA TCCGCTCCGA CCTCGACACC GACCTGGCCG CCGCCGCGTT CCTCGGCGCC CTGCTGACCC GTCAGGCCTT CGGGCGCCAG GCGTTCGGGC GGCCGCGCGC CGGCCCGGGC GGCCCGGGCG GCCCGGGCGG CGAGCCGGGC GAGCCGCCCG AGCCACCCGG TGCGGTCACG GCCTACCACC GCCGGCTCGT CGAGTTCTCC CTCGCCGCGG CGAGGGGCGC CGGGCAGGCC TTTGGCCCCG CGTAG
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Protein sequence | MPPDDPAAEC VRPRRGRPRD ATIDDRVLRA AVDELAGRGV GGFSVNSVAA RAGVAKRGIY TRWATRDDLV LAALGTLAAG LVPPRTGSLR EDLLRLAPLV DAVFTEPRMS ILARCLAELP RYPGLYEAFR RESVDRCAAA VQDAFHDARR RGEIRSDLDT DLAAAAFLGA LLTRQAFGRQ AFGRPRAGPG GPGGPGGEPG EPPEPPGAVT AYHRRLVEFS LAAARGAGQA FGPA
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