| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4185 |
|---|
| Symbol | |
|---|
| ID | 5664569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 5079545 |
|---|
| End bp | 5079949 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641238849 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001504030 |
|---|
| Protein GI | 157963996 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGAAA CTGCATTTAG CTTAACCCTA CAGCCAAGAT TTTGTGAAAC CGACGCCTTA
GGACATATCA ACAACACAGT GATCCCTGTG TGGTTCGAAG CCGCACGTGA GCCGATTTTC
AAGATTTTTA ACCCGACGCA AGACTTGTCT AAGTGGAACT TGATTGTGGC GGGGTTCACC
ATCGCCTTTA ATGCGCCAAC TTACTTTGCC AGCGATATCA CAGTAAAAAC TTGGGTGAGT
CGTATCGGTA ATAGTAGTTT TGAACTGACT CAAAGTTGCT GGCAGAACGG CAAGAAGACC
GCCGAAGCGC AAACCACCAT GGTGCATTAC GATTACACCA ACGAAAAGAG TCAGCCATTG
AGCGAGAGTA TTCGTCAGCA ACTGGCACTG CTTATTGGTG AATAG
|
|---|
| Protein sequence | MSETAFSLTL QPRFCETDAL GHINNTVIPV WFEAAREPIF KIFNPTQDLS KWNLIVAGFT
IAFNAPTYFA SDITVKTWVS RIGNSSFELT QSCWQNGKKT AEAQTTMVHY DYTNEKSQPL
SESIRQQLAL LIGE
|
|---|
| |