| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4178 |
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| Symbol | |
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| ID | 5664562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 5072934 |
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| End bp | 5073983 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238842 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001504023 |
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| Protein GI | 157963989 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAT ACCTATCCCA GCTACTGATA CTCGTGCTCA GCGTAATCGC TATAACCATA
GCGAATGTCG CTAACGCTAA CAGTAGTGAA TTAGACCTGA GTGACTACGA TGCCGATGTA
GCGGCATTGC TACTGGAATA TCAGGGGCAA GACTCCTACT CACGACCAAT AGTGCCATCG
GTGTTGGTGT ATAAAGAAAC CGAGCAGGCT TCAACTTATG TCGACTTTAA ACGGGGTTTG
ATCTTGGTGG AAACCCGCAC TAAAGCGCAG CTTAAAGAGG CTGTGGTGCA AGTACTGTTA
ACCCAGATAG ATCCTACTAT TATCGACGCG CAAACTGCAG AGGACTTTGG TTTAATCAGC
AAAAAGAAGA AGCCATTCTT CTGGGGGCAA GTGCTCGACA GAGACGGCAA GGCGATTGAG
TTTGAATGGC GCGCATCTCG CTATGCCGAC GGCTTGGTCG CGAAAAGCAA ACGAGTGAAC
TCGCGCTTTC AAGTAGCCAT TCACATGGTG AAAGAGCACA CCACCATTGC CGGTAATAAG
TATATAAACT ACGCCCGTAG CGCTAGCCGT AAACACGGCA TCAGTACCGA TCTCATCATG
GCGATTATCG AGACTGAGAG CTCGTTTAAC CCACTGGCAC GCTCACGTTC TAATGCTCTA
GGCTTGATGC AGATTAAGGC TAATACCGCC GGGCGAGATT ATTTCAACTT AATCCAGGGC
TATAAACACA CGCCGTCATC GGCCTACCTT TATGATCCGG CCAAAAATAT TGAGGTGGGC
ACTGGCTATC TAAAGATACT TTCAAGCCGC TACCTTAAAG GGATCACCCA CCCTAAGAAG
CGTGAGTATG CGGTGATCTC AAGTTATAAC GGCGGCGCAG GAAACCTGTG GAAAAGCTTA
GATCCGCGCG GTAATCGCAC CAAGGCCTTA GCGCGAATTA ATAAGATGAC GGTCAGTGAG
TTTTACTGGT TTTTAACCCA CCGCCATAAC CGCGAAGAAA CCCGTAACTA CTTAAAAAAA
GTCAGTAGTC GACAGAAGAA ATACCTGTAA
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| Protein sequence | MSKYLSQLLI LVLSVIAITI ANVANANSSE LDLSDYDADV AALLLEYQGQ DSYSRPIVPS
VLVYKETEQA STYVDFKRGL ILVETRTKAQ LKEAVVQVLL TQIDPTIIDA QTAEDFGLIS
KKKKPFFWGQ VLDRDGKAIE FEWRASRYAD GLVAKSKRVN SRFQVAIHMV KEHTTIAGNK
YINYARSASR KHGISTDLIM AIIETESSFN PLARSRSNAL GLMQIKANTA GRDYFNLIQG
YKHTPSSAYL YDPAKNIEVG TGYLKILSSR YLKGITHPKK REYAVISSYN GGAGNLWKSL
DPRGNRTKAL ARINKMTVSE FYWFLTHRHN REETRNYLKK VSSRQKKYL
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