| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4176 |
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| Symbol | |
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| ID | 5664560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 5070783 |
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| End bp | 5072054 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641238840 |
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| Product | hypothetical protein |
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| Protein accession | YP_001504021 |
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| Protein GI | 157963987 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGATA TCCCTAAGGA TAGGAGTCGG TTAAATAAAA CAAGCTGGTT TTTATTTATC
GTTATTGGAA TTACCTGCGC GATTTTTATT ATTTCTTTAG CGAGCCGTCA GGCCTTCTCT
TCTAATCACG CCAATAGTGA TTCCCTCGTT TCAAGCGTCA AAAATGCTTC CCTAAATATT
ACCATTTCGG GTTATGGCAA GTTTGTTCCA AGAACTCAGC GTGGTATCAA TGCGCTCAGT
GGTGGCCACA TTGTTGAGGT GTTTAAAAAG CCCGGAAACT TGGTAGAAGA AGGCGAAATC
ATCTTAAGCC TTAATAATCC TAAATTACTT CGCTTGCTTG AAACCAGTGA GCTGGCCTTA
TTAGAAGAGC AGGCAAATCA GCAAAGGGTC ATGGCGGAGT CAGCCCAAGA ATTAGAGGAT
CAACGAGGCA AAATCCGGCT TGCAAAAGTA AGACTCGCCC TAGCGGATGC CGAGTTGATT
GCCCATAAAA AACTAAAAGA TAACCAAGTT ATCTCGACCT TAGACTTGCA TAAAGCACTG
GTTGCCTGGG AACAGGAAGA TGCCATGCTA CAGATGGAGT TGAGTCGTTT TCAGACCCTA
AAGAAAACAC GCAAAGCCAT TGAGGACTCC ACTCGGTATC GTTTGGAGAA AGCCATTAAG
CAGCAAGAGC TGTTGCTATC GGAGGTTGAG CAGCTTGATG TTCGTGCGAG CATGGCAGGT
ATGTTGACGG AGTTAGCCGA TGAACTCGAG ATAGGTCGCC ATGTTGAAGA GGGACGAGCG
GTGGGCATGA TCGCGGATCT TTCATCTTAT TATGCCCGTA TCAATATTAC CGCTGCCGAT
GCTGAATATG TCAGTCCAAG TTTAGTGGCT CAGGTTCAGT TTAAGGGAGT GGAAATAAAG
GGGCTGGTTT CTCGTGTCGA CCCAACGGTG AATAATGGTA GCGTTGAAAT TGATATTAGT
TTTAGTGGTG ATTTGCCTGC AGCGGTTAGA CCTAATATCG ATGTGACCGC ACGGGTTGAT
ATTGCTGAGC ATCACAATAC GCTTGTCGTC GATAGACCTG TCGGGGTTGT TCGCGCTCAT
CGTGAGTACC CTATGTTCGT GCTCGATCAG ACCCATTCCC ACTTCCAGCG TCGTCATGTA
TTGGTCGGTG ATATTGCTGG CGATCAGATG CAAGTGTTAG ATGGCCTCTA TCTTGGGGAC
ACAGTTTTAC TCAATGTCCC TAAACATCTG GTCAATTCTT CTCAAATTAT GACGGAAGAT
GTTTATGAAT AA
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| Protein sequence | MFDIPKDRSR LNKTSWFLFI VIGITCAIFI ISLASRQAFS SNHANSDSLV SSVKNASLNI
TISGYGKFVP RTQRGINALS GGHIVEVFKK PGNLVEEGEI ILSLNNPKLL RLLETSELAL
LEEQANQQRV MAESAQELED QRGKIRLAKV RLALADAELI AHKKLKDNQV ISTLDLHKAL
VAWEQEDAML QMELSRFQTL KKTRKAIEDS TRYRLEKAIK QQELLLSEVE QLDVRASMAG
MLTELADELE IGRHVEEGRA VGMIADLSSY YARINITAAD AEYVSPSLVA QVQFKGVEIK
GLVSRVDPTV NNGSVEIDIS FSGDLPAAVR PNIDVTARVD IAEHHNTLVV DRPVGVVRAH
REYPMFVLDQ THSHFQRRHV LVGDIAGDQM QVLDGLYLGD TVLLNVPKHL VNSSQIMTED
VYE
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