Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_4173 |
Symbol | |
ID | 5664557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 5065999 |
End bp | 5067246 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641238837 |
Product | AAA ATPase |
Protein accession | YP_001504018 |
Protein GI | 157963984 |
COG category | [R] General function prediction only |
COG ID | [COG3950] Predicted ATP-binding protein involved in virulence |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGGTT ATATTCAAGG TATCAATACA AAGCTACCTT TCACTGATAA GGTCATCAAT ATAGATCTAC AAGGAAAGAG CTTAATTCTT ACTGGTGGGA ATGGTTGTGG TAAGACAAAC TTTCTAAATC ACTTATTTGA GTATTTAACT AAGAGAGTTG TAGAGCGAGA GAACTATGAT CCACTTGATA TACATCGTGA TATTTCTTAT TACTCAGAGG TAGTCGCACA ATACGGAGAA AGTGATGGTA ACTTTGAGAA TAATAAGTAC AACCTAGAGC TTGCTCAACA AAGACTTATA GACCTTGAAG CCCCAGTGTT GTCTTTGAAT GGTTTAAAAA ACTATATTAT AAATTATCAC TCTAAGAAGG CTTTACTAAC GATATTTAAG GCTGTTCGAG AAGCTAATAT TACTGAATCA ACTTCAGCGG TAAGCGTCTC ATCACTCGTA GAGCAAGTGA ATAGCAGTTA TGAAGAGGTT TCAGTTGGTT CATTGTTTGA GCAATATCTG GTGAGCTATA AAACGGTGCA AGCTTATGCT GAATCCCCGA GTATCGATAA TGATCCTGCA TTAGCTTCTA AAGTAAAAAG TTGGTTTGAG TTTTTACAGG ATAACTTGAG GTATCTGTTT GAAGATGAAA CTCTCGAGCT TAAATTTGAT TCTAAGCTTC AGGCTTTTCA TATAAAGCAA GATCATAAAG AAGCCTTTCG TTTTCAACAG CTTTCATCTG GTTATTCTTC AATTCTTGCT GTGTATGCTC ATTTAGTTAC AACTATTCAG TTAAGCGAGA TAACGCCTGA TGAAATTGAA GGTGTTGTAT TTATCGATGA AATTGATGCT CATTTGCACG TTTCATTGCA ACGTAAGATA TTTGCATTTC TGACTAAGTC ATTTCCTAAG ATTCAATTTA TTGTTACTAC TCACTCACCA TTTGTTGTCT CATCAGTAAG TGATGCTGTC ATTTATGACT TATCAAAGCT CGAACAAATT GATGACCTAT CAATGTATTC GTATGAATCT ATCTTAGATG GGCTATTTGG AGTTTCATCT AGTTCAGATT TATTAAACGC AAAAGTAAAA GAGCTAAATG AAGAGGCAAC AAAACTTCAA CTAGATATCG GCAAGGTTGA GTCTTTGATT TCAGAGCTGC GACAGAATGA ATCTAAGTTG GATTCAGAGT CATTATATTT CTTAGAGTCT GCTCAACTAT CAGTGCTTAA AGCTAAGGCG AAAAGTACAG ATGTTTAA
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Protein sequence | MTGYIQGINT KLPFTDKVIN IDLQGKSLIL TGGNGCGKTN FLNHLFEYLT KRVVERENYD PLDIHRDISY YSEVVAQYGE SDGNFENNKY NLELAQQRLI DLEAPVLSLN GLKNYIINYH SKKALLTIFK AVREANITES TSAVSVSSLV EQVNSSYEEV SVGSLFEQYL VSYKTVQAYA ESPSIDNDPA LASKVKSWFE FLQDNLRYLF EDETLELKFD SKLQAFHIKQ DHKEAFRFQQ LSSGYSSILA VYAHLVTTIQ LSEITPDEIE GVVFIDEIDA HLHVSLQRKI FAFLTKSFPK IQFIVTTHSP FVVSSVSDAV IYDLSKLEQI DDLSMYSYES ILDGLFGVSS SSDLLNAKVK ELNEEATKLQ LDIGKVESLI SELRQNESKL DSESLYFLES AQLSVLKAKA KSTDV
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