Gene Spea_4162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4162 
Symbol 
ID5664546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp5053349 
End bp5054011 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content47% 
IMG OID641238826 
Producthypothetical protein 
Protein accessionYP_001504007 
Protein GI157963973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAG CTCTGCGTAC CTACACCTCG ATTGCATTAT TACTATTTTC TATACCGGCA 
TTTTCCGAAG AGGTGGCGCG AGTCACTCTA GAAAATGGTG CGACGGTCAA ATTAAACGAT 
GACTTCACTT GGGAATATGT GATTCTCGAG AGTCAAATCA AACCTGATAC CGCAGTGCCA 
GTTACCTTAC CAGCTACAGT CGGCACGGTT GTGGCTGTAG AGAGCGCAGC TCCAGCAATA 
TCCGAAGCAC CAACAACAGC AGTGCCGTCG ACATTGCCAG CAAAAACAGA AACGTTAACC 
TCTTCAGCGA TAGCCCAATC GGCACTACTA AAATCAACCG CTAAAGGCGG CGTCAAAGTC 
AGCTTTCTTG ATAGCCAATG GGATGATGAT GGCCGTTTAG GGCTCACCTT CGAGCTTAAT 
AGCAACAGCC CCGAGCACTA CGTAATGATA GAGCTAGAAG TCAGCCTATT TGCCGACTCT 
GGTGCATTAA TAAAGAAAGA GACGGTTAAA GTTTGGCAAG CGGTATTTAG AATGCCTGAC 
ACTTACCTAC GCAAAGGTCA GACTCGTGAC AGTCGCGTAT TCTGGATTGA GGACTTAGAT 
CCTAAGCTAT GGACTAAAGA GTTGATGAGC CTGAAAATCG GTGAGATGGA CTCACGCATG 
TAA
 
Protein sequence
MYKALRTYTS IALLLFSIPA FSEEVARVTL ENGATVKLND DFTWEYVILE SQIKPDTAVP 
VTLPATVGTV VAVESAAPAI SEAPTTAVPS TLPAKTETLT SSAIAQSALL KSTAKGGVKV 
SFLDSQWDDD GRLGLTFELN SNSPEHYVMI ELEVSLFADS GALIKKETVK VWQAVFRMPD 
TYLRKGQTRD SRVFWIEDLD PKLWTKELMS LKIGEMDSRM