Gene Spea_4154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4154 
Symbol 
ID5664538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp5046308 
End bp5047084 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content48% 
IMG OID641238818 
Producthypothetical protein 
Protein accessionYP_001503999 
Protein GI157963965 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATGT GCATTCTATT TGTTGCTCTG CAGACTCACC CCGAATTCCC CCTTATTATC 
TGTGCAAATC GTGATGAATT TCATCATCGG CCCACCCAAG CCGCTCATTT CTGGCCCACG
TCGAACTCGT CAAACAAACT GTTAGCAGGA AAGGACTTAG AGGCCGGTGG AACCTGGCTC
GGGGTAAATC AGCAGGGGGA AATTGGCGGA TTAACCAATA TTCGCGCACC AGAGCTCAAC
CAAAATGATA TGAGAAGCCG TGGTGAGCTA GTGCTAAAAG CCTTAGGTGA TGAGGGCATA
AATCAAGATT GGTTGCAGCT GCATAGCCGT TTCTACAATC CGTTTAACTT GCTCTTTGGC
GACGAAAATA AGCTGCAATG TTTCGATAGT CGCAGCCAAA AATTGAAGCA ACTCTCGCCA
GGGTTTCACT CGATAAGTAA TGGTGCACTC GATGATATCT GGCCCAAAAT GGCGCGCGGC
AGCCAGGCGA TAGAGCAACA TATTTCTAGT CATAGCACTC CTGATATCGA CGCACTACTT
ACGATTATGA TGGATAACAC CCAAGCACCC GATAGCGAAC TTCCGCAAAC AGGGGTCAGC
ATTGAGTGGG AGCGGCACCT GTCTTCAATC TATATCCGGC ATGAAGAATA CGGCACACGT
TCGACGAGCA TTATTTTGAA AGACAAGCAG GGCAAGATAC ATTTCACCGA GGTGAGATAT
GACGGCAAAG GCCGTAATTT AGGTCGAGAC GAGTTTACGA TAGCATCGGG TGAATAA
 
Protein sequence
MFMCILFVAL QTHPEFPLII CANRDEFHHR PTQAAHFWPT SNSSNKLLAG KDLEAGGTWL 
GVNQQGEIGG LTNIRAPELN QNDMRSRGEL VLKALGDEGI NQDWLQLHSR FYNPFNLLFG
DENKLQCFDS RSQKLKQLSP GFHSISNGAL DDIWPKMARG SQAIEQHISS HSTPDIDALL
TIMMDNTQAP DSELPQTGVS IEWERHLSSI YIRHEEYGTR STSIILKDKQ GKIHFTEVRY
DGKGRNLGRD EFTIASGE