| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4151 |
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| Symbol | |
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| ID | 5664535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 5041406 |
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| End bp | 5043571 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641238815 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001503996 |
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| Protein GI | 157963962 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1626] Neutral trehalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAATT GCCTCTTACT CTGTATCGCT AGCCTCTCTT CGCTTGATTC TGCCGATTAT
CAAAATCTAC TGCCTTATCA AGGCACGCCA ACCTCGATGG AGCAGCGTGA TAATAAGGGC
AATCTCACCA TAGGCTCAGT TTATACCGAC CAAGGTGCTT GGCATGGTTT TCACCTGCCC
GATAATGCCG ATTATTACGG CAGCTTTACT GGCCCGCTGT TTATCGCCCA AGAGTACAGC
CTGCACTTGA GTGACAGCTT GCAACGTTTG CAGCTGATCA ACATAGATAA AGATGAATTT
GTGTCACTGG ATAGCGCCAG TCGAATCGAG ATCTATAGCA GGCCAGACGC CTTAGTACAG
TCGTTTACCT GGTCTGATTT TCAACTTAAT TTATCTCTCA GCTATAGCGA TAATCGCACC
GCGGTGATCC GCACCGAGTT AGTTAACCTA TCTAACAAGC CTCAAACTTG GCAGCTCGTC
TGGCACGGTA CACCCTTTAG TTCTCACCCC TCACTTGCCG ATTACCGCTT AATCAAACAG
GCTGAAGTGA GCGCTAACCA TGTTAGTTGG CAGCTCAATC CAATCATGGA AACTTGGCGA
ATTCAGCTAG CCGATGCCGA GTATGAGTTG TGGTTCGATC GAGATATGAA GATTACCCTC
GATGAGCAAT CGGGTTATCG CGCCATTGCT GAGCCCATGA TTCTAGATGC GGGGCAGCAG
CATACGTTTA TATCGGCGCA GCGCTATTTC CACACCCAAG CCGAGCGAAC GGCGCATCAA
GCGCCCGATT GGAGCAAGAT TGACAGTCAG TTGCTGGATA ATCAGGCCAA GTGGCAAGCC
AGGCTCGATA GGGCGATCAA AGGAGGAGAT AAGAGCTCTC GTCAACTCGC AGTAAAAAGC
ATGCTAACCC TAGTGCACAA TTGGCGCAGT CCGGCGGGCG CGCTACAACA TGATGCGATA
ACGCCTTCGA TTACCTATAA GTGGTTTAAC GGTGTATGGG CATGGGATAG CTGGAAGCAA
GCCGTCGCCT TAGCGCGATT CGATCCCGAA TTAGCCAAGT CTAATGTTTT AGCCATGTTC
GATTATCAAT TTACGTCGCA GGATCCGCTG AGACCGCAAG ATGCGGGCAA TCTTCCCGAT
GCTATTTTTT ATAATAAAGA CCGCGAACGT GGTGGTGAGG GCGGCAATTG GAATGAGCGC
AATGGTAAGC CACCACTATC CGCTTGGGCC GTGTGGCAAA TTTATCTGCA GGATAAAGAT
GAAGCCTTTC TTAACATTAT GTATCCCAAG CTTGTGGCCT ATCACGAGTG GTGGTATCGC
AATCGTGACA ACAATGATAA TGGCCTAGCC GAGTATGGTG CCAATCTCCA TCCTATGCAC
CTCAATGAGG ATGGATCGAT TAACCCGCAA GCGGTGATCG AAGCCGCAGC TTGGGAGTCG
GGGATGGATA ATGCGCCGCG CTTCGATATG GATGACGCCT TAGATATATG GCAAAACCGC
CAAGGGGGCC AGCTCGTTGG TTATTCTGTA TCCCAAGAAT CGGTGGATCT TAATGCTTAT
CTCTATGCGG AGAAACGTTT TCTAGAGCAG ATCGCGGCTG TACTCGGCGA TGAAAGCGCA
GCAGAAAAAT GGGACCTTGC AGCCACTCGG CTAGCAAAAC AAATTCAGAT GCAGATGTAT
GATGCCGAGT CAGGCTTTTT CTATGATATT CGTTATACGC CAACCGGTAG CGAGTTGATG
GTTAAGCAAG GTAAAGGCGT CGAGGGCTGG ATCCCGCTTT GGGCTGGAGC GGCCAGTGAG
GCCCAAGCCA AAATTATCGT AGAGCGACAT CTTAATGAGA CGCAATTTGG CACCTTAATT
CCGTTCCCGA CGGTGAGTGC CGATAGTCCT AATTTTGCGG CGGCTAAGTA TTGGCGAGGT
CCAGTATGGT TAGATCAGGC ATTATTCGGT CTACAAGGGG TCGAGCGCTA CGGTTATCAT
GAGCAAGCCC AGAGTTTAGC TAAGCAATTG GTGGTGCAAG GAGAGGGGAT CCTTGGGCAG
AGTCCAATTC GTGAAAATTA TAACCCGCTA ACAGGAGAAG GGTTGCACTG CACCAACTTT
AGCTGGTCAG CTTCGGTATT GTTGCTCATT TATCAGTCAT GGTTAACCGA CGTTGGTGAT
GAATAG
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| Protein sequence | MLNCLLLCIA SLSSLDSADY QNLLPYQGTP TSMEQRDNKG NLTIGSVYTD QGAWHGFHLP
DNADYYGSFT GPLFIAQEYS LHLSDSLQRL QLINIDKDEF VSLDSASRIE IYSRPDALVQ
SFTWSDFQLN LSLSYSDNRT AVIRTELVNL SNKPQTWQLV WHGTPFSSHP SLADYRLIKQ
AEVSANHVSW QLNPIMETWR IQLADAEYEL WFDRDMKITL DEQSGYRAIA EPMILDAGQQ
HTFISAQRYF HTQAERTAHQ APDWSKIDSQ LLDNQAKWQA RLDRAIKGGD KSSRQLAVKS
MLTLVHNWRS PAGALQHDAI TPSITYKWFN GVWAWDSWKQ AVALARFDPE LAKSNVLAMF
DYQFTSQDPL RPQDAGNLPD AIFYNKDRER GGEGGNWNER NGKPPLSAWA VWQIYLQDKD
EAFLNIMYPK LVAYHEWWYR NRDNNDNGLA EYGANLHPMH LNEDGSINPQ AVIEAAAWES
GMDNAPRFDM DDALDIWQNR QGGQLVGYSV SQESVDLNAY LYAEKRFLEQ IAAVLGDESA
AEKWDLAATR LAKQIQMQMY DAESGFFYDI RYTPTGSELM VKQGKGVEGW IPLWAGAASE
AQAKIIVERH LNETQFGTLI PFPTVSADSP NFAAAKYWRG PVWLDQALFG LQGVERYGYH
EQAQSLAKQL VVQGEGILGQ SPIRENYNPL TGEGLHCTNF SWSASVLLLI YQSWLTDVGD
E
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