| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4087 |
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| Symbol | |
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| ID | 5664471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4967741 |
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| End bp | 4969105 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238751 |
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| Product | ABC transporter related |
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| Protein accession | YP_001503932 |
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| Protein GI | 157963898 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA TAGCGCTAGA AGGGATTCAT TTCGGCTATG GATCGAACCA AAGCGAGATC
TTGGATGATC TCAATTTGGT TGTTAATCCG GGTGAATGCC ACTGCATTAA TGGTCCAACA
GGCTCGGGGA AATCCAGTCT ATTGCATCTA CTCGCAGGGG AGCTGTCTCG ACCCTATGAG
GGGGACGTAT ATCGTCATCC CTCATTGTTG GTCGGCCTGG TCATGCAAGA TCCCAATGTA
CAGGTTCTAC GCCAAAGTGT CGGCGCTGAA ATTGCTTTTG CTTTGGAAAA CCTCGGCATA
GCAGCCGACT CCATGGTTGA AAAGGTGCAG CATTCACTGC GGCGAGTCGG CCTGTATATC
AGCCTAGATA CGCCTGTTGA AGTGCTGTCG CTAGGGCAGA AATATCGGCT GATGTTAGCG
GCACAGTTAG TGTTTAAGCC ATCGCTACTG TTACTCGATG AGCCTTGGGC GCAGCTCGAT
GATAATGGCG TGAAAGAGCT CAATAGCGTA CTAAAAGCCT TACTAGATGA TGGCGTGGCG
ATAGTCATGG TCGAGCATAA TCCCAGCGCA TTTGCGAGCT TAGTTGACCA CCTCTGGTTA
CTTGAGGGCG GCCAGCTTAG AGTTGGGCAG CGTCAGCATG CTCCGGCCAT AGCTGAACTC
GTGAACATAA GAGCTAGTGT TAAATCCCGT CATCGTGATT GTGTGGTGAA TATAGCGCCG
CATCAATTTC GTTTTGTTGA CCAAGAGCCA CTGTTTAATT GCGAGCAGAG CTTATCGCTG
CATCGCGGTG AGACTGTAGC TCTAGTTGGC GATAACGGCG CGGGTAAAAG TAGCTTACTG
AAAACCTTAG CAGGCATTCA GGCCAACATC GCTAATTTAC CGATAAAGGT AATGAATAAA
CGACCACAGC TGGGGATTTA TGGCAGCGAT TTAGGCCTAT TAATGCAGCG ACCTAATCGG
CAATTGTTTG AGCAAACGGT ATTAACCGAA CTGCAATTTA GCTTAAAACG CTTCAAGTTA
CCTTTGGTGC GGGCAGAACA GATCTTGGCT GAGCTGGATT TGCAGGCATT AGCAGATTGC
TCCCCACACA AGCTGTCTTA TGGTCAGCAA CATATTATTG CTTTGGCTTC TTTAGTTTGT
TTGCAGCCAA AGCTGTTACT GCTCGATGAT CCTTTTGCAG GCTTAGATAA ACAACATGTG
GCCAAAGTTG TGCAGATTAT ACTGCAATTG AGCGCTCAAG GCTGTGGCAT CTTACTTTCG
AGTCATCGTA GCTTGCCATT TTTAGAAGTA GACCGTTACT GGCTTATTGA AAACGGTCAT
CTGCGTGATG GCGCACAAAT ATCAGAGCAA GTAAATGTGG GCTAA
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| Protein sequence | MKLIALEGIH FGYGSNQSEI LDDLNLVVNP GECHCINGPT GSGKSSLLHL LAGELSRPYE
GDVYRHPSLL VGLVMQDPNV QVLRQSVGAE IAFALENLGI AADSMVEKVQ HSLRRVGLYI
SLDTPVEVLS LGQKYRLMLA AQLVFKPSLL LLDEPWAQLD DNGVKELNSV LKALLDDGVA
IVMVEHNPSA FASLVDHLWL LEGGQLRVGQ RQHAPAIAEL VNIRASVKSR HRDCVVNIAP
HQFRFVDQEP LFNCEQSLSL HRGETVALVG DNGAGKSSLL KTLAGIQANI ANLPIKVMNK
RPQLGIYGSD LGLLMQRPNR QLFEQTVLTE LQFSLKRFKL PLVRAEQILA ELDLQALADC
SPHKLSYGQQ HIIALASLVC LQPKLLLLDD PFAGLDKQHV AKVVQIILQL SAQGCGILLS
SHRSLPFLEV DRYWLIENGH LRDGAQISEQ VNVG
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