Gene Spea_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4062 
Symbol 
ID5664446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4938769 
End bp4939458 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content47% 
IMG OID641238726 
Product3-methyladenine DNA glycosylase 
Protein accessionYP_001503907 
Protein GI157963873 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0000195158 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAG TTGAAAAGTT TGCCGCTATC TACGCCAGAG CATCGCAGAG AAAGGGTGGT 
GATGAGAGTT TAGAAAGTCT ATTGCCGACG GGATTGGCGG ATGAGGAGTT GACTCAGTTT 
ACCGATGCGC AGCTGCTATC CGAGATAAGC AAGAAAGTCT TCCAAAGTGG CTTCGTATGG 
CGAATTGTTG AGGCTAAATG GCCTGAGTAT GAGAAAGCCT TCTTTGGTTT TGAGCCTTTT 
AAAGTTTTGA TGCTGTCGCC GGAGCAGCTA CAAGATCGCG CCAGTGATCC TAAATTGATC 
CGTCACCTGA AAAAGACCAT GTCGATTTAC GACAATGCCC ACATGGTTAA CGATCTCGCG 
GCTGAGCACG GCAGTTTTGC TAAATTTATT GCTGACTGGC CGAGTACTGA TATTACTGGA 
CTTTGGGCCG AACTTAAGCG TAAAGGGACT CGATTGGGTG GCAATACTGG GCCTTATTTT 
CTTCGCTCCA TGGGTAAAGA CAGCTTTTTG CTTACCAATG ACGTGCAAGG TTATCTGAAG 
AGCCACGGCT TAGTGGATTA TGGTTTTAGC TCTAAGGCGG GGTTAAAGCA GGTGCAGAGT 
GTATTTAACC ACTGGCAGCA GGAGTCGGGT AGAAGTCTCG CCGATATAAG CCGAGTACTA 
GCTTGTAGCG TTGGCGACAA TCGTATTTAA
 
Protein sequence
MAQVEKFAAI YARASQRKGG DESLESLLPT GLADEELTQF TDAQLLSEIS KKVFQSGFVW 
RIVEAKWPEY EKAFFGFEPF KVLMLSPEQL QDRASDPKLI RHLKKTMSIY DNAHMVNDLA 
AEHGSFAKFI ADWPSTDITG LWAELKRKGT RLGGNTGPYF LRSMGKDSFL LTNDVQGYLK 
SHGLVDYGFS SKAGLKQVQS VFNHWQQESG RSLADISRVL ACSVGDNRI