Gene Spea_4032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4032 
Symbol 
ID5664416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4896994 
End bp4897662 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content49% 
IMG OID641238696 
Productcarnitine operon protein CaiE 
Protein accessionYP_001503877 
Protein GI157963843 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAGG CGCAACAGCC AAGTAGTGAG CCGTGTGATC TATTAAGAGT AAAACAATTT 
ATGCCCTGCT ATGAATTTGA AGGATTAACT CCTGTTGTCG ACCCGAGCGC TTATGTGCAC 
CCAACAGCTG TGCTGATAGG GGATGTCATT GTCGAGGCTG GTGTGTATAT CGGCCCCAAT 
GCTTCACTGC GTGGTGATTA TGGACGTTTG ATTTTGCAGC GAGGTAGTAA TTTGCAAGAT 
GGTTGCATCA TGCATGGATA CTGCGACATG GATACGGTTG TTGAGCCTGA TGGTCATATC 
GGTCATGGCG CTATTTTGCA TGGCTGCGTA ATAAAGCGTA ACGCCTTAGT GGGGATGAAT 
GCGGTGGTGA TGGATGGCGC TGTGATTGGT GAAGATAGCA TGGTCGCCGC CATGAGCTTT 
GTTAAAGCGG GCTTTCAAGG TACGGCTAAA CAGATGTTGA TGGGACAACC CGCCAAAATG 
GTACGCGAAG TGACTGAGCA GGACTTGCAT TGGAAAGGGC TTAATACGCT GGAATATCAG 
GTGTTGGCAC AGCGCTCGGC GAAGACAATG CAGCCTGTTA CGCCGTTAAC TCAGCAGGAA 
GTTAACAGGC CTAGATTAAA AGGGGTGACC GAGGTGCAGC CCAAAGCGCA GCAAACACAA 
GCCGGATAA
 
Protein sequence
MFEAQQPSSE PCDLLRVKQF MPCYEFEGLT PVVDPSAYVH PTAVLIGDVI VEAGVYIGPN 
ASLRGDYGRL ILQRGSNLQD GCIMHGYCDM DTVVEPDGHI GHGAILHGCV IKRNALVGMN 
AVVMDGAVIG EDSMVAAMSF VKAGFQGTAK QMLMGQPAKM VREVTEQDLH WKGLNTLEYQ 
VLAQRSAKTM QPVTPLTQQE VNRPRLKGVT EVQPKAQQTQ AG