| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4030 |
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| Symbol | |
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| ID | 5664414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4894801 |
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| End bp | 4895691 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238694 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001503875 |
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| Protein GI | 157963841 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.790637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA ACATTCCGTT AAGGGCGTTA CAGGTTTTTG AATCATGCGC GAGGTTGGAA
AGCTGTTCGC TTGCTGCGAA TGAGTTGTGC ATCACCCAGA GCGCTGTCTC ACAACAGATA
AAGCTGCTTG AAGATTACTT CTTAGAAAAG CTATTTCACC GCAACGCGGG AAAGATCACC
CTTACCGAAT CAGGACTTGA GCTTAGGCAG AGGTTGGCAC CTGTTTTCTA TGATTTAAAT
AGTGTCTGCG CAAGCTTAGT GCCGGATATG TCTAACGAGG TTAGGGTTCA CTCCTATAAC
TCTTTAGCCG CTCGCTGGCT GGTGCCTAAA ATGGCAAAGC TAAGAGCGGA GCACCCAGAG
TTCAATATTA ATGTAGGCAT GTTCCAAGAT GATGTCGAGA TGAGCGATAT GCTCGCCGAC
ATCTTTATTA TTACTCGTGA ATGCCAAGAT GGTTATACCA TCATCCCATT AGTGGAAGAG
AAGCTGGTGG CATACTGTAG CCCCAAGTAT TTGGAGAAAC ATCCTAATAT CTCTTCAGAA
ACCTTCCATG AGCAGACGCT GCTTTACTCG AAGCACAAAG ACTATGGTGT CGATTGGGAA
GGCTGGTTCA GGTTTAACAA GGTGGCTGTG GGCCCCTTGC AGCGGAAAAT CGTATTCAAC
CACAATATGC TTGCGGTTCA GGCGGCCATT TTTGGGCAAG GCATCGTTTT GGGTCTAGAG
CAGACCCTGC AGATTGAAGT CGACTCAGGA AATCTCGTTA AGCTGGAGCT CCCCCATTGT
TTTACAGGTT GGACCTACTC CATCGCTTTT AAGTCTTCAA GAAAACGGGA TGCCCGCATA
ACCAAGATTG TCGATTGGAT AATTGCAGAA TATGCGAGCA GCGTATCTTA G
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| Protein sequence | MNNNIPLRAL QVFESCARLE SCSLAANELC ITQSAVSQQI KLLEDYFLEK LFHRNAGKIT
LTESGLELRQ RLAPVFYDLN SVCASLVPDM SNEVRVHSYN SLAARWLVPK MAKLRAEHPE
FNINVGMFQD DVEMSDMLAD IFIITRECQD GYTIIPLVEE KLVAYCSPKY LEKHPNISSE
TFHEQTLLYS KHKDYGVDWE GWFRFNKVAV GPLQRKIVFN HNMLAVQAAI FGQGIVLGLE
QTLQIEVDSG NLVKLELPHC FTGWTYSIAF KSSRKRDARI TKIVDWIIAE YASSVS
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