| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3991 |
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| Symbol | |
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| ID | 5664375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4849339 |
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| End bp | 4850529 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641238655 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001503836 |
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| Protein GI | 157963802 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCAGTAT TAGAGCGAAG TTTGCGCTAT CTGTTTATTC CTATTGTCAT CACCTTTCTC
TATATCGTGA TCACCCAGCA TCTATCGACA ATATGGCAAG GCTGGCTACC TAAAATAAAT
GAGCTGCCCT ATTTCTTACT CGGCATATCC GCAGTCCTAG CACTGCTGTT TAATTGTTGG
CGTATAAGTT ATCTGTCGCT ACTCTTGCTT GGGTATTACT ACTTTGAATC AAGCCCAGCG
CTGCTCCCGG AGCTGGCATT GCTGAGCCAA GAGCAGGTGA TCCTGACTGG TACCTTAATA
ATTACTTTCT TTGCCACGTT CAAAGACAGG GCACTATTCT CAATATATTT TTTCAAGACT
GTTCTCGCGA TAGGGCTATG CGTTATCTTA ACCTTGGGCT GGAGCGCAGT GATTACTCAC
CTCAGCTCTG TCGATGCTGG ATTGCTACCC AATACACTCA AACTGCTTAC CTCTTTATAT
GCCCCTATCG GCATATCATG CATAGTACTT TGTATTTTTA CGATTTGGCG TGCGACGGGT
GTCGACTCCG CTATCATGGT TACACTCTTC ATCTGGTTAT TTCATTTCTA TCTACCCGAT
GAGTTACCCC TGTCGATATT GCTAACCATA CTCGCCCTAG CATACTTAAC CTCTATCTTA
GTCAGGAGCC ATAATCTTGC CTACAGAGAC GAATTGACTG GACTAGCCTC TCGTCGCTCT
CTCAATACTT TGGCCCATTC ACTCAATAAG CATTACTGCC TCGCTATGGT CGATATCGAT
CACTTTAAAA AGTTTAACGA TACCTATGGC CATGATGTTG GTGATCAAGT GTTGCAATTA
GTAGCAAAGA AACTCAGTAA GGTAGAAGGG GGCGGCAAGG TATTTCGCTA TGGCGGAGAG
GAGTTCACCA TAGTGTTCAC CAATAAAAAC ATAGAAGCTG TATTGCCTCT ATTGGAAGAG
ATCCGACGTA AAATCAGTCA ATACAATATC GTGCTGCGAA ATCAGCGGCG AAAAAATCAG
AGCAAATTAA ATAGAGATGA GGGCCACAAA ACAAACCCTG TGGTAAATAT TACTATCTCG
ATCGGGGTGG CCGAACAGCA CGGAGAAACC TCGTTTGAAA ACACACTTAA ACGTGCCGAC
AAGGCCCTCT ACAAGGCAAA AAACAATGGT CGTAATCAAG TATTTGCCTA G
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| Protein sequence | MPVLERSLRY LFIPIVITFL YIVITQHLST IWQGWLPKIN ELPYFLLGIS AVLALLFNCW
RISYLSLLLL GYYYFESSPA LLPELALLSQ EQVILTGTLI ITFFATFKDR ALFSIYFFKT
VLAIGLCVIL TLGWSAVITH LSSVDAGLLP NTLKLLTSLY APIGISCIVL CIFTIWRATG
VDSAIMVTLF IWLFHFYLPD ELPLSILLTI LALAYLTSIL VRSHNLAYRD ELTGLASRRS
LNTLAHSLNK HYCLAMVDID HFKKFNDTYG HDVGDQVLQL VAKKLSKVEG GGKVFRYGGE
EFTIVFTNKN IEAVLPLLEE IRRKISQYNI VLRNQRRKNQ SKLNRDEGHK TNPVVNITIS
IGVAEQHGET SFENTLKRAD KALYKAKNNG RNQVFA
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