| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3945 |
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| Symbol | |
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| ID | 5664329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4798113 |
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| End bp | 4799060 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238609 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001503790 |
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| Protein GI | 157963756 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTCG CTAAACTCTC TCACATCAGC ATGAAGCATC TGATCACCCT GCACGTGATG
CTCGATACCC TAAGTGTAAC CGCCAGTGCC GAGCGCCTGT GTTTGAGTCC ATCGTCGGTG
AGTAAAACCT TGAGTCAACT TAGGCTCAGT CTCGACGACG AGTTGTTCTA TCGTCACGGT
AACAAGCTGG TGGCCACACC GCTGGCTCGC AGGCTTGGGC CGAGTGTGCA TCAAATTATC
AATGACATGA ATCAGTTGGT CACTCAAGAA GCGTTTAATC CCGCAGAGTA TAAGGGGCGT
TTCTCCTTAG CGATGCGTGA AAGCACCTTC GAGTTATTGG CCGCTAAATT CATGGCCCAT
GTGCTAACGC TTGCACCTAA TATTCGTTTA GATATTTTTG CTAAAGACAG CGTGGGTTTT
GAGGGGCTAG TCAAAGGTAA CTTAGACTTT ATCTTGTTGC CCCACGATAG AAGTCAGCCG
CCGATCTCCC AGCAGCAATT GGTGTGGGAG ACCTTACTCA ACGACGAGAT GGTGTGTCTG
ATGAATCCGG AGCATCCATT AGCGAGTCAG GCACAGATCT CTATTGATGA TTACCTAAGT
TTTAGCCATA TCAGTATTAG CGATAGCGAC CTAAATACGC CATTTTTTGA GATGCAGCTA
GCCCAGCAGT CACGCAATCG CGCGGTACCT ATCTCGGTGG CCGACTTTGG AAGTGCGGCA
CTGCTGTGTC ATCACAGTGA GCTGCTGTTT ACCTGCTCGC GGCGTTGGGC TGAAACTGCG
TTTCAAGCCC AAGGTTTGGT GACCAAGACG ATGCCTTTGG ACTATGGCGA GGTGGCCTAC
AGTTTGGTGT GGCATAAGCA GAGTATGAAT GACCCCGCTT TGCGCTGGTT GTATCAACAG
TTGCTGGAGT TTACTCGAAT GGAGTTTACT CGAATGGAGT TTCAATAA
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| Protein sequence | MDLAKLSHIS MKHLITLHVM LDTLSVTASA ERLCLSPSSV SKTLSQLRLS LDDELFYRHG
NKLVATPLAR RLGPSVHQII NDMNQLVTQE AFNPAEYKGR FSLAMRESTF ELLAAKFMAH
VLTLAPNIRL DIFAKDSVGF EGLVKGNLDF ILLPHDRSQP PISQQQLVWE TLLNDEMVCL
MNPEHPLASQ AQISIDDYLS FSHISISDSD LNTPFFEMQL AQQSRNRAVP ISVADFGSAA
LLCHHSELLF TCSRRWAETA FQAQGLVTKT MPLDYGEVAY SLVWHKQSMN DPALRWLYQQ
LLEFTRMEFT RMEFQ
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