| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3893 |
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| Symbol | |
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| ID | 5664277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4738464 |
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| End bp | 4740221 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641238557 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001503738 |
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| Protein GI | 157963704 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG4261] Predicted acyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTTG CCCTCGTTAT CCCCAACTAC AACCATGCTG GTGCCATCGA GCAGACTCTC
GAACGCCTGG CAGCCTTCGA GCTTCCCTGC TACCTCATTA ACGATGGCAG CGATGATGAA
ACTCGTTTTA TACTGATCGA GCTTGCCGAA AAGTACGACT GGGTGACCTT GCTACACCAT
CCGTTTAATC GTGGCAAAGG CGCTGCGGTG ATGACGGGGC TACGCACCGC TTATGCCGAT
GGCTTTACTC ATGCGCTACA GGTCGATGCC GATGGTCAGC ATGACTTAGA TGATATTCCG
GCAATGATAG AGCGGGCAGA ATTAGCGCCA GAGGCATTAA TTTCAGGTCT GCCACAGTAC
GATGATTCCG TACCAAAGGG CCGCCTCTAT GGCCGCTATA TCACCCACTT CTGGGTGTGG
ATAGAAACCT TAAGTTTCGA TATCCAAGAC TCCATGTGTG GCTTTCGCAT CTACCCACTA
GCCGCGACTG AGAAACTGTT TTTAAGCCAT GCCTTGGGCG AGCGCATGGA TTTTGATATC
GAAGTGTTAG TGCGTCTTTA CTGGCAAGGG GTAAAGGTTA TCCATCTGCC GACAAGAGTC
ATCTACCCCG AAGATGGGGT GAGCCATTTT CAAGGCCTCA AAGATAATGT GCGCATCTCT
TTGATGCACA GTAAGCTCTT CTTTGGCATG TTATTGCGCC AACCTAAAAA GTTGTTTCAA
AGGCTAAAGC ATTCTCTCGT AGGCTCTAAC CAAAACAAAC ATTGGTCCAA CATGCGTGAG
CGTGGCAGTT ATTGGGGCAT AAAACTGATC GCCGAAAGCT ACCGCCTAGG CGGCCATTGG
CTATGCCGCG CCATCATGTA TCCGGTGATT GTTTATTTCT TCTTAACCGG TACTACCGCA
CGCGATGCAT CGAAGCAGTT TCTAACTCAT GTTAAGCACC AGCGCCCTAA CCACCCACAC
TTAGGTGAGC CACTCAGTTG GCGCGATAGC CTGAAGCACT TTTTCGCCTT TGGTAACGCC
GCCCTCGATA GAATCGATGC CTGGTGCGAT CGCATCAAAC TCGAACAGGT CGATTTCCCT
AATCGTGAGA TGCTCGCTAA CCAATTACTA GCAGGTAATG GCGCCGTATT ATTGGTCTCA
CACCTAGGTA ACTTAGAGCT ATGTAGAGCC ATATCTATCC ACCAGCGCCA AGTCAAAGTT
AACGTCATGG TGCTGACACA AAATGCCGAG AACTTTAACA AGGTACTCAA GCAACTCAAC
CCCGATAGCT CATTAAACCT GATTCAGGTG ACAGAACTCG GCCCGAGTAC ATCAATGCTA
TTGCAGCAAA AGATCGAAGC CGGTGAACTG GTGGTTATTG CAGGGGATAG AACCTCTTCG
CAAACCGCTG GACGAGTTAT CTATCAGGAG TTTCTAGGTG AGCAGGCCGC ATTCCCACAG
GGGCCATTTA TTCTGGCGGG ATTGCTGGAC TGCCCGGTTT ATACCATGTT CTGCCTACGT
CAAAATGGAC GCTACCATGT GCACCTAGAA CATTTCGCCG AGACCTTAAA AGGCCCAAGG
GCAGGACGCA GCCAACGAAT TGAACAGGCC GTAAACGAAT TTAGCCGGCG CTTAGAGCAC
TTTGCTCTGA GTGAGCCGCT GCAATGGTTT AATTTTTATG ATTTCTGGCG CAAGGACGAA
GAGTTCCAAC GTGCAGATGT GCAAAGCAGT GAACGCTGTA GCAGTAGTAG CAATACTAAA
GGACAAGCAA GTAAATGA
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| Protein sequence | MRLALVIPNY NHAGAIEQTL ERLAAFELPC YLINDGSDDE TRFILIELAE KYDWVTLLHH
PFNRGKGAAV MTGLRTAYAD GFTHALQVDA DGQHDLDDIP AMIERAELAP EALISGLPQY
DDSVPKGRLY GRYITHFWVW IETLSFDIQD SMCGFRIYPL AATEKLFLSH ALGERMDFDI
EVLVRLYWQG VKVIHLPTRV IYPEDGVSHF QGLKDNVRIS LMHSKLFFGM LLRQPKKLFQ
RLKHSLVGSN QNKHWSNMRE RGSYWGIKLI AESYRLGGHW LCRAIMYPVI VYFFLTGTTA
RDASKQFLTH VKHQRPNHPH LGEPLSWRDS LKHFFAFGNA ALDRIDAWCD RIKLEQVDFP
NREMLANQLL AGNGAVLLVS HLGNLELCRA ISIHQRQVKV NVMVLTQNAE NFNKVLKQLN
PDSSLNLIQV TELGPSTSML LQQKIEAGEL VVIAGDRTSS QTAGRVIYQE FLGEQAAFPQ
GPFILAGLLD CPVYTMFCLR QNGRYHVHLE HFAETLKGPR AGRSQRIEQA VNEFSRRLEH
FALSEPLQWF NFYDFWRKDE EFQRADVQSS ERCSSSSNTK GQASK
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