Gene Spea_3892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3892 
Symbol 
ID5664276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4738078 
End bp4738464 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content48% 
IMG OID641238556 
ProductBeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 
Protein accessionYP_001503737 
Protein GI157963703 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGAT CTAAATTGCC CCCTATCATC GACTGTAAAG ATGACCAAGA TTCAGTAACT 
TGGACCATAG AAATTGCCGC CGACCTTGAT TTTTTCTCGG GGCACTTTCC AGAGCAGCCC
GTGTTACCCG GCGTGACTCA ACTCGACTGG GCAATTAAAC TTGGCTGCAA GCATTTCGGC
TACCCCGTCA ATGTCGCCAC CCTTGAAGTA CTCAAGTTTC AGCAACTTAT GCTACCCAAT
AGCCGAGTCG AGCTAACCAT TAGCCACAAT CCGGCTAAGG CTAAACTCAT GTTTGCCTAT
AGCGATGGTG ACAAACGTTT CGCATCGGGG CGTATCGCGC TCAATAGTGA AACAACCCAA
GTTATCAACA GCGCGGATAG CAACTAA
 
Protein sequence
MIRSKLPPII DCKDDQDSVT WTIEIAADLD FFSGHFPEQP VLPGVTQLDW AIKLGCKHFG 
YPVNVATLEV LKFQQLMLPN SRVELTISHN PAKAKLMFAY SDGDKRFASG RIALNSETTQ
VINSADSN