Gene Spea_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3873 
Symbol 
ID5664257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4718783 
End bp4719481 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content46% 
IMG OID641238537 
Producthypothetical protein 
Protein accessionYP_001503718 
Protein GI157963684 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGGCC GACTCAATAT TATCGATGAC ATGTTTGTAC AAGCGCTGAT GCAAGACTTG 
CGAGTGAAGA ACGCTGAGGA GATGCTGTTT GGACGCTTTA AAATGCCAAC CAATGACATT 
AGCATCGTCC GCGAAATCGA TGGTGAGCGC AGATTACAAA CCGCCACTTG GTGGTTACTG 
CTTGAGACTT GCTATGAAGG CTTCAAGCCC TGCCATTACA CCTCATTTAA CACCCGCTTT 
GATAAACTGA ACACGCCCAA TAGCGCAGGC TTTAAGCCAT TTAGAGAGAG TCGTTGTGTA 
GTTGTAGCCA GTGGCTTTGG TGAAACTGAG AAGCGTGGCA AAGAGGTGTA TTATCATGAT 
TTTATCGCCG AGAACTCAGC GATAGTATTT GGTGGTCTGT TTCGAGAATG GCAACATCCT 
AAGACGGGTG AAACCACCAC ATCCTGTTCC ATCATCACCA ATCCACCGCA CCCAGATCTA 
CTGCCTTATC ACAGCAAGGC TAGCCCGATG ATTTTGCCGC AAAATGATGA AGTGATTGAT 
GCCTGGTTAA ATCCTGCTAA CCAGCAGATA GAGATGTTTG ATGACTTACT CAAGCCAGCT 
TTGAGGCATG ACTTTATGGT GCAGCAAATA AATAAGCCAA GCCAGTATCA ACCTATTGGT 
CAAACTGCTC GGCTTATTCC TAACGACTAT TATGTCTAG
 
Protein sequence
MCGRLNIIDD MFVQALMQDL RVKNAEEMLF GRFKMPTNDI SIVREIDGER RLQTATWWLL 
LETCYEGFKP CHYTSFNTRF DKLNTPNSAG FKPFRESRCV VVASGFGETE KRGKEVYYHD 
FIAENSAIVF GGLFREWQHP KTGETTTSCS IITNPPHPDL LPYHSKASPM ILPQNDEVID 
AWLNPANQQI EMFDDLLKPA LRHDFMVQQI NKPSQYQPIG QTARLIPNDY YV