Gene Spea_3866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3866 
Symbol 
ID5664250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4699284 
End bp4699976 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content42% 
IMG OID641238530 
ProductTetR family transcriptional regulator 
Protein accessionYP_001503711 
Protein GI157963677 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.599707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGAC GGGATAGAGA AGTAAAGTTA CTCGATATAG CCAGAGAATT GATCCTTGAA 
TATGGCATGG TATCGTTTAA ATTCACCGAT ATTGCCAAGC GTGCCGAAGT ATCTCGAGCC 
ACATTATATA AGTACTTTTC AGGCAAAGAA GATGTATTGG TGAGTCTGTT TGTTCATGAT 
GCAGAAAATA CAAAACAGAT GCTGGTGGAT ATCCAGGCTG ATCTTACACT TAATAATCGA 
GAGAAAATTT TACTCAGTTT GCTGGCTCCA GTTGCAAGCT CGATGGAAAC ATTAAATCGT 
TCCGGCACCT TGTTGTTAAG TGCCAACCCA GGGATCTTTA TGTATGCGAG CGATAAACAG 
CAGGCGCGGC TTGAGCAGAT CGTCTCCGAA ATACGACAGA TAACCCTCGA GTTTTGGCTC 
GTTCCCTTTA ATCAAGGTCA TATGGGGGTT GCTCAAGAGT TGCTAGAAGA GGCGATGGCA 
TTGACCTTTC CTTATCAAAG GGGATGTATT GTTATCCCTC AAAGCGTGAT GAACGTTGGT 
AAGCATATTC ATTATCCTTT AAGGAGAGTA TTTGAGAACC TGTTGAAATC GACAGAGTCA 
TTGAATTGGT GTGAAAAGCA CGCAGATGTT GATTATGAGA AAGTCTTGAT TGGCATTGGT 
CGGCATAAGA AAGAGGGCAT GATTGCCTGT TAG
 
Protein sequence
MIRRDREVKL LDIARELILE YGMVSFKFTD IAKRAEVSRA TLYKYFSGKE DVLVSLFVHD 
AENTKQMLVD IQADLTLNNR EKILLSLLAP VASSMETLNR SGTLLLSANP GIFMYASDKQ 
QARLEQIVSE IRQITLEFWL VPFNQGHMGV AQELLEEAMA LTFPYQRGCI VIPQSVMNVG 
KHIHYPLRRV FENLLKSTES LNWCEKHADV DYEKVLIGIG RHKKEGMIAC