| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3759 |
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| Symbol | |
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| ID | 5664144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4573563 |
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| End bp | 4574039 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238419 |
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| Product | MSHA pilin protein MshC |
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| Protein accession | YP_001503605 |
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| Protein GI | 157963571 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00178977 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAGAG CACGGCAACA TGCAGGCTTT ACATTAGTGG AGCTGGTAAC CACGATAATC
CTTATTGCCA TTCTCGCCGT GGTGGTTATT CCTCGCCTGC TTACCAGCTC AAGTTACAGT
GCCTTTACCC TGCAAGATGA GTTTATTAGT GAGCTGCGCA AGGTGCAGAT CATGGCGATG
AACAATCAAG ATCGCTGCTA TCGTTTATCG GTCACCGATA CCCATTACCA AGTTTCTCGC
TTTAATGGCG CCTGTAGTGG CACACCTGTG CGTACCGATG CCGCGCAACC GTTTCAAGGT
GGCGCTAGCC TAGCTTTGCT TAATGGCGGT GCTAGCAGTT TTAATATCGA ATTCAATCTC
CAAGGCGTCC CGCTAGTGGA TGGTGCACCT TGCAGCGGTA ATTGCATCAG CATCATCGCC
GATGAAACCC TATTTCTAGC GATAGAATCA GAAGGTTATA TCCATGATGG GCAGTAG
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| Protein sequence | MHRARQHAGF TLVELVTTII LIAILAVVVI PRLLTSSSYS AFTLQDEFIS ELRKVQIMAM
NNQDRCYRLS VTDTHYQVSR FNGACSGTPV RTDAAQPFQG GASLALLNGG ASSFNIEFNL
QGVPLVDGAP CSGNCISIIA DETLFLAIES EGYIHDGQ
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