| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3711 |
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| Symbol | |
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| ID | 5664096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4517320 |
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| End bp | 4518282 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238371 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001503557 |
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| Protein GI | 157963523 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.336724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATACAA ATACAGATCT AACTGCAATG AACGAACTCC ACTGGCTAAT CGATATGGTG
CAAACCATAG AGGTAGGCTT AGTCGTGCTC GATCGTGATT ACAACATCCA GCTGTGGAAT
GGTTTTATGG AAAACCACAG TGGCGTAGCC CCTAATTCAA TTAAAGGCAA AAACCTGTTT
GAGCAGTTTG ATTACCTGCC AGCTACGTGG CTGAAGCAGA AAATGGAGTC GGTTTACCTA
TTAAAGAACC GAGCCTTTAT CAGCTGGGAA CAGAGACCCT TTGTGTTCCA GTTCAAGAAC
TATCGGCCGA TTACTGGCAG AGCGGACTTC ATGTATCAAA ACGTCACTCT GCTGCCGCTG
TCATCACTCA CTGGTGAAGT GACCCATATC AGTATGATCG TCTATGACGT CACCGACGTT
GCGATCAATA AACTACAGCT AAAGTCGGCC AATGAACGCT TTGAGCATTT AAGCCAGATA
GATGGACTGA CTCAGCTATT TAATCGCCGT CATTGGGAAC AGTGCTTACA GAAGGAGTTC
GATCGCCATG CTCGCTATGG CAGTGACACC AGCTTAGTGA TGCTCGATAT CGATCACTTC
AAGTCGATCA ATGACACCTA CGGTCATCAA GCAGGCGATA AAGTCCTTCA AAACGTGTCA
CACCTAATTA AAAAATCACT GCGTGAAACC GATTGCGCAG GGCGTTATGG CGGCGAAGAG
TTTGGTGTAG TGCTAGCCAA TACCCCTGCG GCTAATGCAC GATTCTTTGC CGAACGTTTG
CGAAAGAAAC TCGAACAATT AGAGATCTGC TATGAAGAAC ACATCATTAA GATCACTGTG
AGCTTAGGCA TATGCGAAAT CAAGCCTGAA ATCATGGATA GTGATACTTG GCTGTCATTA
GCCGACCAAG CCCTTTATCA GGCGAAAGAA GCTGGCCGCA ACTGCACTAT CGCTCACGAG
TAA
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| Protein sequence | MDTNTDLTAM NELHWLIDMV QTIEVGLVVL DRDYNIQLWN GFMENHSGVA PNSIKGKNLF
EQFDYLPATW LKQKMESVYL LKNRAFISWE QRPFVFQFKN YRPITGRADF MYQNVTLLPL
SSLTGEVTHI SMIVYDVTDV AINKLQLKSA NERFEHLSQI DGLTQLFNRR HWEQCLQKEF
DRHARYGSDT SLVMLDIDHF KSINDTYGHQ AGDKVLQNVS HLIKKSLRET DCAGRYGGEE
FGVVLANTPA ANARFFAERL RKKLEQLEIC YEEHIIKITV SLGICEIKPE IMDSDTWLSL
ADQALYQAKE AGRNCTIAHE
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