Gene Spea_3708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3708 
Symbol 
ID5664093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4514577 
End bp4515137 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content39% 
IMG OID641238368 
Producthypothetical protein 
Protein accessionYP_001503554 
Protein GI157963520 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGC TATTACTTTG CATTCATTTA TCAAGGCTTC CTTATTTTAG TATTGGAACT 
CAATTACTCA TGCGTGAACT TTTTGAACGT TTTCTCTGGA GCAGCCGTTT ATCGGTCATG 
TTTGGTGTCT TGTCATGTAT TGTGGCGGCG TTTGTCGTTT TTGCCATGGG GCTGAGAGAT 
GTAGTGCACA TGATTGAGCT GATTATGGGT TATATATTTA GCGGTAGCCA TGCAGTGCGT 
AATGATCTAG TGATGGTGGT GGTGGAGATC TTAGATACAT TCTTATTAGG CGCAGTTTTG 
CTTATCTTTG CTTTTGGTTT ATACGAGCTA TTTATTAGTA ACCTGAAAAG TGCCGGTACA 
AGTGAAGCAG GCGGTAAAAT TCTGATCATT AGCAGTATAG ATTCATTAAA GAGTAAGCTA 
GGTAAGGTGA TCTTAATGAT GCTGATCATT AAGGTATTCT CTTTCTTTAC CGAAATGAAA 
CCAACTTCTA TGCTTGAGCT ACTCTATATG GGCATTACCG TAGTATTGAT CGCAGGAGCT 
TTGAAGCTTA GCAAAGACTA A
 
Protein sequence
MSELLLCIHL SRLPYFSIGT QLLMRELFER FLWSSRLSVM FGVLSCIVAA FVVFAMGLRD 
VVHMIELIMG YIFSGSHAVR NDLVMVVVEI LDTFLLGAVL LIFAFGLYEL FISNLKSAGT 
SEAGGKILII SSIDSLKSKL GKVILMMLII KVFSFFTEMK PTSMLELLYM GITVVLIAGA 
LKLSKD