| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3674 |
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| Symbol | |
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| ID | 5664059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4471892 |
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| End bp | 4473541 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238334 |
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| Product | BCCT transporter |
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| Protein accession | YP_001503520 |
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| Protein GI | 157963486 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACG ACGATAAAAG CGAATACTTA ATGTCGAATT TGACACAATC TGTTGAGCGT
AAATCAACTG ATGAAAATTA CCTTGCGGCG CATCCGCCTG AGCGAAGTGA TGCATCAACC
ACTAACGCCT TTGCCAGTCC TGTACTCTGG TTAAGTGGCG GCTTTCTCGT TCTCTTCGTA
CTGCTTGCTG TTTTCGATAC CTCCGCTCTG TCCAGCGTCA TTCAAGTTGG ATTCTCAAAA
GTGACCCTAT GGTTTGGCCC TTTTTGGCAA GTTCTGCTGT TGGCTAACTT TGTGATTGGT
CTCTACTTAG CCTTTGCTAG AACTGGCGAT GTTACCTTGG GTAACCTTAA AGCGCCGGAA
ATGGATACCT TCAAATGGTT GGCTATTATC CTGTGTACCC TATTAGCGGG TGGTGGTGTA
TTTTGGGCGG CGGCAGAGCC TATCGCTCAC TTTGTTTCTT CGCCGCCATT TTATGGTGAA
GCTGAAGGTC GCAGGCTGGC AATCAATGCG TTATCGCAAT CATTCCTGCA TTGGGGCTTC
TTAGCGTGGG CGATACTCGG TAGCTTGGCG GCAATCGTGT TAATGCATCT GCACTACGAC
AAAGGCTTAC CGTTGCAACC TCGCACCTTG TTGTATCCCA TTTTTGGCGA CAGAGCGCTT
AATAGCTGGG TTGGTACCTT AACCGACACT TTCTGTATTA TTGCAGTGGC TGCGGGCACC
ATTGGCCCTA TCGGCTTCCT TGGCCTGCAA ATCAGCTACG CACTCAATGA ACTTTTTGGT
GTGCAAGATA CCTTAATCAC CCAAAGTTTG GTGGTAGTGT TTGCTATCGC CATGTATACC
TTGTCGGCAT TGAGCGGCCT TAGCCGCGGC ATTCAGCTAG TTAGCCGCTA CAATATTTTA
CTTTCAGTCG CACTCATCAT CTTTATTCTA TTATTTGGCC CAACCAGCTT TATTGTTGAT
GGTTACATGC AAGGCGTGGC GAGAATGGTG AATGATTTTG TGCCTATGTC GCTCTATCGT
GGTGATGCCA ACTGGCTAAG TTGGTGGACG GTATTTTTCT GGGGCTGGTT TATTGGTTAT
GGCCCTATGA TGGCTATTTT CATTGCGCGT ATTTCTCGTG GCCGCACGAT TCGCCAATTG
ATCCTGTCGA TTTCTATTAT TGCACCGCTA ATCACCTGTT TCTGGTTTAG TGTTGTTGGT
GGTTCAGGTC TAGCATTTGA GCTCGCTAAC CCTGGTGTTA TTGCTAATGC ATTTGAAGGC
TTTAACTTAC CAGGCGTGTT GCTGGCGATT ACTTCACAGC TGCCAATGCC GACGCTGATA
GCGATACTGT TTTTGATCCT TACGACTACC TTCATTGTTA CTACGGGTGA CTCGATGACT
TACACCATTA GTGTGGTTGT CACCGGTTCT ACCGAGCCTA GTGGGGCAAT GCGTGCGTTT
TGGGGCATAT TGATGGGGCT GGTTGCTATC GCGCTAATTG CGATGGGCTC GGGCGGCATT
TCCGCCTTAC AATCCTTTAT TGTGATCACC GCCGTTCCGG TCTCTTTTGT GCTACTACCT
ACTTTGTGGC AAGCGCCTAA AATGGCGAAA GCGATGGCGG AGCAGCAATT TGGCAAAGCC
TCGCTTAATC AACAAGCAGA GCGCTCGTAG
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| Protein sequence | MADDDKSEYL MSNLTQSVER KSTDENYLAA HPPERSDAST TNAFASPVLW LSGGFLVLFV
LLAVFDTSAL SSVIQVGFSK VTLWFGPFWQ VLLLANFVIG LYLAFARTGD VTLGNLKAPE
MDTFKWLAII LCTLLAGGGV FWAAAEPIAH FVSSPPFYGE AEGRRLAINA LSQSFLHWGF
LAWAILGSLA AIVLMHLHYD KGLPLQPRTL LYPIFGDRAL NSWVGTLTDT FCIIAVAAGT
IGPIGFLGLQ ISYALNELFG VQDTLITQSL VVVFAIAMYT LSALSGLSRG IQLVSRYNIL
LSVALIIFIL LFGPTSFIVD GYMQGVARMV NDFVPMSLYR GDANWLSWWT VFFWGWFIGY
GPMMAIFIAR ISRGRTIRQL ILSISIIAPL ITCFWFSVVG GSGLAFELAN PGVIANAFEG
FNLPGVLLAI TSQLPMPTLI AILFLILTTT FIVTTGDSMT YTISVVVTGS TEPSGAMRAF
WGILMGLVAI ALIAMGSGGI SALQSFIVIT AVPVSFVLLP TLWQAPKMAK AMAEQQFGKA
SLNQQAERS
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