Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3671 |
Symbol | |
ID | 5664056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4467837 |
End bp | 4468493 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641238331 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_001503517 |
Protein GI | 157963483 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGAA TAGATGAGCA ATTTGAAGGG AATGATTTTA GTCATCAAGA CTTGAGTGAT TCACATTTTG AACGATGTAA GTTTTATAAC TGTAATTTTA ATCATACCGA TCTCAGAGAC AGCCGTTTTG TCGACTGCTC ATTTATCGAG TCCGGTTCAC TAAGCGGTTG CAACTTTGAG TATGCGAACT TGCAAGATTC GAGCTTCAAA GGTTGTCAGT TATCTATGGT GAGCTTTACT GGGGCTAATT GCTTCGGCGT GGAGTTTAGA AACTGCGACT TAAAGGGGGC TAACTTTCTT AAGGCGAGCT TTGCCAACCA GATCAGTCGA CAAGCCTATT TTTGTTCTGT GTATATCACT GGCTGTAACT TGTCTTACGC TAATTTTGAG CGTCAATGCA TAGAGAAGTG CGATCTATTT GAAAACAAAT GGACTGGAGC AAATTTATAT GGGGCATCGT TTAAGGGATC AGATTTGAGC CGGGGGGATT TTTCCAGTGA TGCCTGGGGG CAGTTTAATG TGCGAGGCTG CGATCTTTCT TATGCTGAGC TATCAGGGTT AGACCCAAGA AAGGTGGATC TCAGTAATGT CAAAATATGT ATGTGGCAGC AGGAGCAGCT ATTAGCGCCT CTTGGAGTCA TTGTTGGGGC TGACTAA
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Protein sequence | MNRIDEQFEG NDFSHQDLSD SHFERCKFYN CNFNHTDLRD SRFVDCSFIE SGSLSGCNFE YANLQDSSFK GCQLSMVSFT GANCFGVEFR NCDLKGANFL KASFANQISR QAYFCSVYIT GCNLSYANFE RQCIEKCDLF ENKWTGANLY GASFKGSDLS RGDFSSDAWG QFNVRGCDLS YAELSGLDPR KVDLSNVKIC MWQQEQLLAP LGVIVGAD
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