| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3451 |
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| Symbol | |
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| ID | 5663837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4219098 |
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| End bp | 4220069 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238107 |
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| Product | DNA-binding transcriptional regulator DsdC |
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| Protein accession | YP_001503299 |
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| Protein GI | 157963265 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02036] D-serine deaminase transcriptional activator |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCACAT CACAATTTGA GAAGTCAGTC ATGTATTCCC AGCAAGATGT GTTCAGCAGA
AGCCGCTTAC TTAGCAGTTA TCAACTGGCA AAACTGCATA CCTTCGAAGT GGTGGCTCGT
CACCAATCCT TTTCTCTCGC CGCCGAAGAG CTATGTGTCA GCCCCTCGGC CGTTAGCCAT
AGAATTAGCG CACTGGAGAG TGAGCTAGGC TTTAAACTAT TTAGCCGCTT TCATCGAAGA
ATCGAGCTAA CTGAAGACGG TAAACGGCTG TATTCAAAAC TGAAAGACAG TTTAAAAAGC
CTGAATCAGG AGGTGTTTGA GATTAAAAAC CAAGAGGTGT CGGGTAAGCT GACTGTCTAC
TCTCGCCCCT CCATTGCCCA GTGTTGGCTA GTGCCTAAGA TTGCCGATTT CAGCCGCCAG
TATCCGGCGA TCTCGATTAA TATTTTGACG GGCAACGAGA ATGTTAACTT CAACAGTTTT
CATATCGACT TGGCGATCTA CTACGACAAT CGCCCCCGCA GCAAACTGTT TTGCCAGCAC
TTGATGGATG AGACCATCAT GCCAGTCTGT AGCCCTGAGT ACGCCGCCGA GCATGATCTT
ATCGGCAAGC CTGAGCACTT GAGCCGTTGC ACCTTGCTAC ACGACAACCA AGCCTGGGAG
TACGATTCAG ATTGTGATGA ATGGAAGTAT TGGGCCGAGA CCCAGAGCCT CAGTATTGAA
GATAACCGCT CAATCGGTTT TGACCGCTCA GACTTAGCCG TCATCGCCGC CATGAACCAT
GCCGGTATCG CCATGGGACG TGGTCAACTG GTGAGTAAGC GCATAGTCAG AGGTGAACTC
ATCGCCCCCT TTGCTGGCCA ACAGGTAAAC TGTGAGCAGA CCTATTATGT GGCTTCCCAT
GACAAAGAGC TCAACCCTAA GGCTAAGCTG TTTGTTGAGT GGCTAAAGCA ACAAGCAAAC
CAAACTTTAT AG
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| Protein sequence | MLTSQFEKSV MYSQQDVFSR SRLLSSYQLA KLHTFEVVAR HQSFSLAAEE LCVSPSAVSH
RISALESELG FKLFSRFHRR IELTEDGKRL YSKLKDSLKS LNQEVFEIKN QEVSGKLTVY
SRPSIAQCWL VPKIADFSRQ YPAISINILT GNENVNFNSF HIDLAIYYDN RPRSKLFCQH
LMDETIMPVC SPEYAAEHDL IGKPEHLSRC TLLHDNQAWE YDSDCDEWKY WAETQSLSIE
DNRSIGFDRS DLAVIAAMNH AGIAMGRGQL VSKRIVRGEL IAPFAGQQVN CEQTYYVASH
DKELNPKAKL FVEWLKQQAN QTL
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