| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3422 |
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| Symbol | |
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| ID | 5663808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4181389 |
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| End bp | 4182255 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641238078 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001503270 |
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| Protein GI | 157963236 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.803212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTA GCTTAGATGA TCTACATCTG TTTGTATTAA CCGTGCAACA TGGTGGAATT
AGCGCTGCGG CAAAGCAACA TTCGCTCCAA CGCTCGAAAG TGAGTCGGCG CCTGCAGGAG
TTAGAAAAAA CCTTAGGTTG CCAGCTACTT ATTCGCACGA CTCGTCAAAT TGAGTTAACC
GAGAATGGCC GGTTGCTTTA TCAGCAGGTC AGTCAGCCGC TAACCGAGGT CACCCAAGCC
GCCAAACTCC TTAGCAATCA GCAGAAATCA TTGCAAGGTG TGTTACGCGT CGCGGTCCCA
GCAGCGCTTA TCACCTCCAA TATGTTTAGC CTATTAATCG ATAAATACCT AGGCCAGTTT
CCCGATGTCT TGTTAGAGGT ACTACACTGT CAGGAGAGCG TCGATCTCAA ACGAGAGAAT
ATCGATATCC AAATCTTACC CGACGGAGTG AAAGTGCAAA ATGAAGATTA TGTACAACAA
ACCCTGCTGC GTTTTCCCAG TAGTTTAGTC GCATCAAAGG AATACCTTCA AAGCCACCAG
CCCATTACAG AGTTAAGTGA GTTAGTCGCT CACCCATTAA TGGTCAGTCG CTATAACCAA
GCCTCTTTAC CCGATACCCT AACCCTTAGG CTCTGCTCTG ATGATCTGCG CTTAATTCAG
CATATGGCGA CAACGGGCAA AGGCATTGCG CTGCTGCCAA GTATTTTACT TAAAGACGCC
CTTAAATCCG GTGAGTTAAC CGCAATATTG GTCAACGAAA AACTACCTGA AATCAAACTG
ACGCTTATCT ACCCTTCAAA GCAGTTTTTA CCGGAAAAGA CCCGAGCGCT AATCACACTG
CTTAGAGATA CTTTTAAACT CACTTAA
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| Protein sequence | MNISLDDLHL FVLTVQHGGI SAAAKQHSLQ RSKVSRRLQE LEKTLGCQLL IRTTRQIELT
ENGRLLYQQV SQPLTEVTQA AKLLSNQQKS LQGVLRVAVP AALITSNMFS LLIDKYLGQF
PDVLLEVLHC QESVDLKREN IDIQILPDGV KVQNEDYVQQ TLLRFPSSLV ASKEYLQSHQ
PITELSELVA HPLMVSRYNQ ASLPDTLTLR LCSDDLRLIQ HMATTGKGIA LLPSILLKDA
LKSGELTAIL VNEKLPEIKL TLIYPSKQFL PEKTRALITL LRDTFKLT
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