| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3421 |
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| Symbol | |
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| ID | 5663807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4180221 |
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| End bp | 4181288 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238077 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001503269 |
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| Protein GI | 157963235 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACCG CAGAACATGC TTTTCGTCGT TGGATGCAAA GCTTGCTTGT TATCTTCATC
ATTTTGATTG GCTATATCGT TATTGCCGAC CGCTATGCAC CACTCACTAC AGAGAGCCGA
GTGCAAGGTT ACGTGATCCA AATTGCCCCG GAAGTCACAG GAAGCGTCAC TGAGGTTCAG
GTGTACAATA ATCAGAAGTT AACCAAGGGA GATAAGCTAT TTCGTATCGA TGCGCGTAAG
TATCAGCTTG CGTTGGAGAA AGCCCTGTTG GCGCTAGAGC AGGCCCATGA ACAGGAGGAG
GCTATGTACG CCAAAGTGGA GGTGGCTGAG GCAAAAGTCG CCACTAATCA AGCCGCTTTT
GATAATGCCA GAAGTGAGTA TCGACGGATC AGTCAGCTGG CGAAGCAAAA GCTAGTCTCG
GTGTCTATGT TAGATAACGC TCTAGCAAAT AATAATGCAT CTGGAGCTAA TCTACGCGCT
GCTCAGCAGG AGCTGCGGGC ATTAACCGTG CAGCTTGGTA GTCAACCTGG GCAGAGTAGT
GGTGTCCGTT CAGCTCTAAA TGCACTTAAA CAGGCGAAGC TAGATCTTTC CCATACTCAA
GTGGTTGCAC CGAGTGATGG CGTGGTTACC AACTTGCAAT TGGAGGTAGG GAGCATTGCC
AATGCCAATA TGCCGTTACT GACTTTTATT CCTACAGACT CACTCTGGGT TGCCGCAGAC
TTTCGTGAAA AAGCAGTCGC TCGAATAAAC AGTCACTCAC GTGGGCTGGT TGCATTTGAT
GCCTTTCCGG GGCGGGTATT TGCTTTAAAT GTGCAGAGCC GTGACTTTGG GGTGGCGGCG
GCTCAGCAAA GCCCTAACGG CCAATTGACT CAGGTTGAGA CTAATAATCG TTGGGTGCGG
GATGCCCAGC GAGTGCGGAT TAACCTGAGC AGCCCAAGTG CATTACCTAA TCCGCTATTT
GTTGGCTCTC GTGCGAGTGT GGTGATCTAT CCAGATGATA ATGCCTTTTG GAGCTTGTTA
GCCAAGACTC AAATTAAGAT CGTGAGTTGG CTTCACTTCA TTTATTAA
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| Protein sequence | MQTAEHAFRR WMQSLLVIFI ILIGYIVIAD RYAPLTTESR VQGYVIQIAP EVTGSVTEVQ
VYNNQKLTKG DKLFRIDARK YQLALEKALL ALEQAHEQEE AMYAKVEVAE AKVATNQAAF
DNARSEYRRI SQLAKQKLVS VSMLDNALAN NNASGANLRA AQQELRALTV QLGSQPGQSS
GVRSALNALK QAKLDLSHTQ VVAPSDGVVT NLQLEVGSIA NANMPLLTFI PTDSLWVAAD
FREKAVARIN SHSRGLVAFD AFPGRVFALN VQSRDFGVAA AQQSPNGQLT QVETNNRWVR
DAQRVRINLS SPSALPNPLF VGSRASVVIY PDDNAFWSLL AKTQIKIVSW LHFIY
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