Gene Spea_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3395 
Symbol 
ID5663782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4150415 
End bp4151089 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content40% 
IMG OID641238052 
ProductRDD domain-containing protein 
Protein accessionYP_001503244 
Protein GI157963210 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA TGCCCGACTA TGCTTCGTAT AGTTATGATG AGCTACTGGA TGTAGAGCAA 
CATATAAATA AACAACAGTA CCCAGAGCGT TATGCTGCGA TTATTGGACT CATAAATGAC 
CCTCGTTATC TAAAAGAGGA TAAACAGGAA TGTGAGAGTC GTGAGCAAGA TAGTAAATAC 
TCGACTTTTT GGCCGCGTTT CTGGGCGGCT ACGCTTGATG GTATCTTGTT CAGTGCGTTA 
CTTATCGGTC AATGCTACTT ATTGGGTGTT GAGTACGACC AGCAGAACCA CTTTCAACAA 
GCCATTCACG GCATGCAACT CTGTATCTAT ATCATCTTAA TGCATGGTTT TTTCGGTCAG 
ACTCTTGGGA AAATGTGCTT AAAAGTTAAG GTCCTAAATC ATGATGACGA GACGAGAATT 
GGACTTAAAC AAGCGTTCAT AAGAGAGTCG ATTAACTTCG CCATTAATGC ATTCTGGTTA 
AGTTTATTGA TCTATATCGG AGTGACCGTA GGGCTAAATG GCAACATTTC AGATTCACTA 
ATTAATATCA TGGTTGCATT TGGCATATTG GCATTCATCT GGGCAATTTC AGAGTTTATT 
ACCATGCTAT CTAACAAAAA ACGCCGTGCA CTTCACGACT ATATAGGCAA AACCGTTGTT 
GTCAGAATGC AGTGA
 
Protein sequence
MDKMPDYASY SYDELLDVEQ HINKQQYPER YAAIIGLIND PRYLKEDKQE CESREQDSKY 
STFWPRFWAA TLDGILFSAL LIGQCYLLGV EYDQQNHFQQ AIHGMQLCIY IILMHGFFGQ 
TLGKMCLKVK VLNHDDETRI GLKQAFIRES INFAINAFWL SLLIYIGVTV GLNGNISDSL 
INIMVAFGIL AFIWAISEFI TMLSNKKRRA LHDYIGKTVV VRMQ