Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3393 |
Symbol | |
ID | 5663780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4148597 |
End bp | 4148938 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641238050 |
Product | TM2 domain-containing protein |
Protein accession | YP_001503242 |
Protein GI | 157963208 |
COG category | [S] Function unknown |
COG ID | [COG2314] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAACC TTGATTGCCC ACAGTGCAGC CACAAAATCG ACCTTAATTC AGTTTCTTGC CCCCAATGTC ATGCTGCACA AGGGTTTGAA TCCCTTGCCG GAGTCGATCC TGATATGCGC ATCAAAAACC AGAAGCTCGC GATATGGTTT AGCTTCCTAC TAGGTGGATT GGGGCTACAT AAGTTCTATT TAGGTCAACA CCTAAAGGGC AGCCTGTACC TAGCATTTAG CTGGACACTG GTACCTATGG TTGTTGGCTG GGTCGATGCC ATCCGCACCT TGAAGATGAC GCCATTTAAC TTTGAACAGC GTTACTGCAA ACGAGTGTCA CAGGGATTTT AA
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Protein sequence | MQNLDCPQCS HKIDLNSVSC PQCHAAQGFE SLAGVDPDMR IKNQKLAIWF SFLLGGLGLH KFYLGQHLKG SLYLAFSWTL VPMVVGWVDA IRTLKMTPFN FEQRYCKRVS QGF
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