Gene Spea_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3393 
Symbol 
ID5663780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4148597 
End bp4148938 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content47% 
IMG OID641238050 
ProductTM2 domain-containing protein 
Protein accessionYP_001503242 
Protein GI157963208 
COG category[S] Function unknown 
COG ID[COG2314] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACC TTGATTGCCC ACAGTGCAGC CACAAAATCG ACCTTAATTC AGTTTCTTGC 
CCCCAATGTC ATGCTGCACA AGGGTTTGAA TCCCTTGCCG GAGTCGATCC TGATATGCGC
ATCAAAAACC AGAAGCTCGC GATATGGTTT AGCTTCCTAC TAGGTGGATT GGGGCTACAT
AAGTTCTATT TAGGTCAACA CCTAAAGGGC AGCCTGTACC TAGCATTTAG CTGGACACTG
GTACCTATGG TTGTTGGCTG GGTCGATGCC ATCCGCACCT TGAAGATGAC GCCATTTAAC
TTTGAACAGC GTTACTGCAA ACGAGTGTCA CAGGGATTTT AA
 
Protein sequence
MQNLDCPQCS HKIDLNSVSC PQCHAAQGFE SLAGVDPDMR IKNQKLAIWF SFLLGGLGLH 
KFYLGQHLKG SLYLAFSWTL VPMVVGWVDA IRTLKMTPFN FEQRYCKRVS QGF