| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3365 |
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| Symbol | |
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| ID | 5663752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4109473 |
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| End bp | 4110735 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641238022 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001503214 |
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| Protein GI | 157963180 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCAGG ACACTAGCGC ACAAGATGTG ATAAAGCAGC AGAGTAAGGC GAGCAAAATA
AAACGTCCGT TGATGTTTGG CCTTGCGGCG TTACTTGTTT CTGGACTTGT CTGGTCGAGC
ATGGACAGAG ACTCGATTGC CACTTCAATT AAACGCTCTG AACTGCGTTT CGCAACCTTA
GAGCGCGGTA CTCTTATTCG CGATATCCCC ACCACAGGCA AGATTGTTGC TGCCAATGCG
CCTGTCTTAT ATAGCCCGGA ACAGGGCTCG GTTACCTTGA TTGCTAAGCC CGGTGACAAG
GTTGAGCTGG GTGAGGTGGT GGCCACCATC GAAAGCCATA AGCTAACCAA CAGTTTAAAG
CAGCAGCAAG CAGTACTTGA GGGGATGAAA AGCTCGCTGG AGCGTGCTCG TCTCGATGCT
CGTCGTCAAC AGCTAAAGGC GCAACAAACT TTGGATATGG CCAAGGTGGA TTTAGAAGCG
GCTGATCGAG AGAGTCGCCG TGGCGACCAG TTGATAGAGT CAAAGCTAAT TAGCAAAATT
GATTTCGAAA AGAGTAAAGA TGATCTGCAT AAGGCCAAAT TGCTATTTGC CCATGCGGGT
CAAGAAGCAC TGCTAATGAA AGACACCTTA ACCTTCGAGC TTAAGAACAC CTCCCTAGAA
GTTGACCGTC AGGCGCTGGT GGTCAAAGAG CTCGAACGCC AAGTGGCGGC ACTGAATATC
ATCGCGCCCG TTGCAGGTAT TATTGGTAAT TGGCTTACGG AGCAAAAAGC ACGTATTGGT
CAGAGCCAAC CCATTTTGAC CGTTGTCGAT CTCAGCGCCT TCGAGGCCGA GCTTGCAGTG
CCAGAGTCTT ATGCCGATGA GTTAGGCATA GGTATGGTCG TTGAGCTGAG CTTCGGCTCG
GAGAAAGTGA TGGGCGAGCT GTCTTCTATC TCTCCCGAGG TGCGTAACCG TGAAGTGAGC
GCAAGGGTGC GATTTGAGCA AAATGACCGT CTGCAGCTAC GCCAAAACCA GCGTTTGGCG
GCGCGAGTAT TACTGGAGCA CAGGCCCGAT GTGTTGATGG TTAAGCGTGG ATCTTTTGTT
AACAGCGGTG GCGGACAGGA GGTGTATGTG ATGCATGGCG ATATTGCCGA GCAGACCCCT
ATTCAGTTAG GTGCACGCAG CATGAGCCAT ATCGAAGTGA TCCTAGGCGG CCAAGAAGGA
GATATCTGGG TGACCTCGAG CATTGAGCCA TTTAATAAAG CAGCGCAAGT GATCGTTCGC
TAG
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| Protein sequence | MIQDTSAQDV IKQQSKASKI KRPLMFGLAA LLVSGLVWSS MDRDSIATSI KRSELRFATL
ERGTLIRDIP TTGKIVAANA PVLYSPEQGS VTLIAKPGDK VELGEVVATI ESHKLTNSLK
QQQAVLEGMK SSLERARLDA RRQQLKAQQT LDMAKVDLEA ADRESRRGDQ LIESKLISKI
DFEKSKDDLH KAKLLFAHAG QEALLMKDTL TFELKNTSLE VDRQALVVKE LERQVAALNI
IAPVAGIIGN WLTEQKARIG QSQPILTVVD LSAFEAELAV PESYADELGI GMVVELSFGS
EKVMGELSSI SPEVRNREVS ARVRFEQNDR LQLRQNQRLA ARVLLEHRPD VLMVKRGSFV
NSGGGQEVYV MHGDIAEQTP IQLGARSMSH IEVILGGQEG DIWVTSSIEP FNKAAQVIVR
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