| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3360 |
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| Symbol | |
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| ID | 5664822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4102730 |
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| End bp | 4104094 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641238017 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001503209 |
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| Protein GI | 157963175 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATA CAGTGGTTTC TCTTAGAGTT AAGCTTATTA TCAGCGCAGT GCTCGCTTCA
GCTACGGGCT TGTTGCTGGC ATTCACAGGC CTGTTATGGC TGTCACCTGT AGCGGTGCAG
CAAAATGTTG TAGAGCAATC CTGGCTCTAC TTGCTGTTAT TTACTCTGTC TTTGCTGTTA
GTAACCAGTA TTAGTTACAT CGGCACTCGC GACTTAGCGA CGAGTTTAAG AGCGTTAGAG
GTCGGCTTAC TTAACTTTAA AGATAATGAC TTTAGCGTGA GTATACCTGT CAGTGGTGAC
AGCCAATTAA GAGCATTATC GACTCTGTTT AATGAGTCGG CGCAGACATT GCGTAAAGAG
CGGCAGTACA TTTATCAACG TGAATTGCTG CTCGACAAAG TCATACAAAG CTCGCCTAAC
GTGATGCTGC TACTCGATGA TGAACAGCGG GTCATCTATG CCAATGATGC GGCGAGACAT
TTGTTTAATA GCGGTCAACG TGTTGAAGGT ATGAGCCTAT CGCAATTGTT GACAGATGCC
CCTGAATCTT TGAGTGAGGC ACTTAATAAT CCTAAAGATG GTCTGTTTTC GCTAAAGCAT
GATGCTGGTG AGAGTGATCT AGAAACTTGG CACTTGTCCC GAGGCCAGTT TCTGTTAAAC
GGTCAGTTTC ATCACTTGGT GTTACTAAAG CAGTTGACTA GAGAGCTAAA TAGGCAGGAG
GTGGCAGTAT GGAAGAAGGT GATTCGCATC ATCAGTCATG AGCTGAATAA CTCGGTTGCA
CCAATAGCTT CTATGGTTAA CTCTGGGCGA ATGATCACCA AAGAGCTCAA CGATCCAAAA
CTGAAGCTTA TTTTCGATAC CATCGAAGAT AGAAGCAGTC ATCTGAGCCA GTTTATCTTC
AACTATGCTC GTTTTGCTAA ATTGCCATTG CCGCAAAAGT TGCCTGTCGA TTGGCATTCA
CTCATTCAGC AACTAAAACA GCATTATCGG TTTGAGCTCG TGGGTGAGCT ACCTCAAAAT
CAGGTTAGTC TGGACTTGAT TCAGATGGAG CAAGTACTGC TTAATCTGCT GAAAAACGCC
CATGAATCGG GCTCAGATTT GACAAAGATC ACCATAGAGA TCAGAGAGGT AAATCAAGTG
GACCCCAGCA GCGGGATCTA TATTGAAGTA AAAGATGAAG GTCTAGGAAT GTCGGCAGAT
GTACTGCAAC AAGCGTTATT GCCTTTTTAC TCAACAAAGC AATCCGGTAC AGGCTTAGGC
TTGCCTCTTT GTCGAGAGAT AGTTGAGGCG CACGATGGAC GAATTAGCCT ACATCATCGG
GATGATAAAG GTCTATGTGT GAGCCTCTGG TTACCCTATG CATAG
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| Protein sequence | MSNTVVSLRV KLIISAVLAS ATGLLLAFTG LLWLSPVAVQ QNVVEQSWLY LLLFTLSLLL
VTSISYIGTR DLATSLRALE VGLLNFKDND FSVSIPVSGD SQLRALSTLF NESAQTLRKE
RQYIYQRELL LDKVIQSSPN VMLLLDDEQR VIYANDAARH LFNSGQRVEG MSLSQLLTDA
PESLSEALNN PKDGLFSLKH DAGESDLETW HLSRGQFLLN GQFHHLVLLK QLTRELNRQE
VAVWKKVIRI ISHELNNSVA PIASMVNSGR MITKELNDPK LKLIFDTIED RSSHLSQFIF
NYARFAKLPL PQKLPVDWHS LIQQLKQHYR FELVGELPQN QVSLDLIQME QVLLNLLKNA
HESGSDLTKI TIEIREVNQV DPSSGIYIEV KDEGLGMSAD VLQQALLPFY STKQSGTGLG
LPLCREIVEA HDGRISLHHR DDKGLCVSLW LPYA
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