Gene Spea_3349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3349 
Symbol 
ID5663737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4094050 
End bp4094874 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content46% 
IMG OID641238007 
ProductIon transport protein 
Protein accessionYP_001503199 
Protein GI157963165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00642666 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTGCGA ACGTTTCTGG CCTGCAGTCA AAGCTTAAGC TGATTGACAA TAGTAAGGTT 
TTTCAAGGTT TTGTTATTTT TGTCATTGTG GTGTCGGCGT TATCCATTGG CGCGCATACC
TATCATCTCC CAGCGTGGAT GGAGCAAAGC TTAGTCGTAC TGGATATCGG TATTACGGTG
TTTTTCGCCA TTGAACTTGT GATCCGTTTT CTTGCCAGTG ACGGCCCGAA GCGGTTTTTC
AGTAACGGTT GGAATGTTTT CGACACCATG ATTGTTATTG GTAGCCTTAT TCCTGCTGGT
GGCTCGGCTA TTTTGCTCGC CCGTTTATTG CGAATTTTTA GGGTACTGCG TTTGGTCTCT
ATGATCCCAG AACTAAGAAT GCTAGTGAAT GCGCTATTAA AGGCTATCCC CCGAATGGGC
TATATCGCTT TACTGATGTT TGTGATTTTC TATATATACG GCGCTGTAGG CAGTATGTTT
TTTGCCAATG TGAATGACTT CCTCTGGGGA GATGTCTCAG TTGCCATGCT GACCCTGTTC
AGGATCTCGA CCTTCGAGTC TTGGACATCG ATCATGTATG AGACCATGGC GGTATACCCT
CTGAGCTGGA TCTATTATCT AAGCTTTATC TTTTTAACTG CCTTCGTGTT TTTAAATATG
ATGGTAGGAG CCGTGCTAGA TGTGATGACC CAAGAGACGG CCGCCATGCG TGGTGAGCTG
GCTTCTGATG AAGCAACTGA TAAACCTGCT AGCGCAGCAG ATGTAGCAGA GATTAAAGTG
CAAATTGAGG AGCTAAAGGC ACTGCTGCTG AGAAAGGCGA GTTAA
 
Protein sequence
MLANVSGLQS KLKLIDNSKV FQGFVIFVIV VSALSIGAHT YHLPAWMEQS LVVLDIGITV 
FFAIELVIRF LASDGPKRFF SNGWNVFDTM IVIGSLIPAG GSAILLARLL RIFRVLRLVS
MIPELRMLVN ALLKAIPRMG YIALLMFVIF YIYGAVGSMF FANVNDFLWG DVSVAMLTLF
RISTFESWTS IMYETMAVYP LSWIYYLSFI FLTAFVFLNM MVGAVLDVMT QETAAMRGEL
ASDEATDKPA SAADVAEIKV QIEELKALLL RKAS