Gene Spea_3344 details

Gene Information

• Locus tag: Spea_3344
• Symbol: torD
• ID: 5663732
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 4087154
• End bp: 4087819
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641238002
• Product: chaperone protein TorD
• Protein accession: YP_001503194
• Protein GI: 157963160
• COG category: [R] General function prediction only
• COG ID: [COG3381] Uncharacterized component of anaerobic dehydrogenases

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAAAG ATGCTGTGAA CACAGAGACA GTAGAAGTTA ACCCAGTTGA TCAGGTTAGA 
AGCACGATTT ATCAATTACT TTCGTCACTA TTTGCCAAAG AAATTGATCA TAAGATTCTG 
CATGATTTAA CCAGTGAGCA GGCGCAGCAG TTTTGGGCGC AGCTGGGTAG CGAGGCTGAA 
TTTAAAGCTG ACGTCGATGT TTTAGTCGCC GAGCTTGCTA AGCTCAATAC TGATAAAGCA 
TTACTAGAGC TTGCCGCCGA TTATTGTGGC TTGTTCTTGG TCGGTACTAA ATACAGTGCA 
TCGCCTTATG CCAGCTTGTA CTTAGACGAC AAGCCAGCAA AGAAAGGTGA TGAGCCGCTA 
CTCTTTGGTG AACAGCATCA GCAGATGACT CAGTTTTTAA AACAGAGTCA ACTGCAGGTA 
CAAAGTGAGT TTCCAGAGCC TGCTGACCAT CTAGCAGTGA TCTTGGCCTA TGTGGCTCAC 
CTTTGTACTC ATAGTGATGA AGCCGAGCAA CACAGCTTTA TCAAGGCCAA CTTAGCTAAC 
TGGTTAGGCA ACTTTGTTGC TAAGGTTACT GAGGTGGACA CCGGCAACTT CTACCAAGCT 
TTGGCGCGCC TCACCTACTC TTGGGTGAAG TCTGATGCCG AGTGGCTTGA GTCTGAATTG 
AACTAA 

 

Protein sequence

MIKDAVNTET VEVNPVDQVR STIYQLLSSL FAKEIDHKIL HDLTSEQAQQ FWAQLGSEAE 
FKADVDVLVA ELAKLNTDKA LLELAADYCG LFLVGTKYSA SPYASLYLDD KPAKKGDEPL 
LFGEQHQQMT QFLKQSQLQV QSEFPEPADH LAVILAYVAH LCTHSDEAEQ HSFIKANLAN 
WLGNFVAKVT EVDTGNFYQA LARLTYSWVK SDAEWLESEL N