Gene Spea_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3336 
Symbol 
ID5663724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4078765 
End bp4079262 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content46% 
IMG OID641237994 
Producthypothetical protein 
Protein accessionYP_001503186 
Protein GI157963152 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGCG TTATTCTTGT ATTAGGTTCG CCTAACGATA ACCAAGGCCG TCTTTCTGAT 
ATTGCGATAT CGCGCTGCCA AGCAGCGCTT TGGCAATATC AATTACGTCC AGACAGTAAA
GTACTGCTCA CTGGTGGCTT TGGTGAGCAT TTTAACCAAA CTAACACCGC CCACGCTCTT
TATTGTCAGG CTTACCTTAT TGACCACGGC ATGCCTAACA GCGCCTTTAC CGATATTGCC
CTTAGCCGCT TCACATTTGA AGATGCCATA CTGTCGAAGC CTATCGTTGA GGAGCATGGC
TTTAGAGAGC TTTGCCTTGT CACGTCAGAG TTTCATTTGC CTAGAGCAAG GCTTATTTTT
AGCCAAATTT TTGCAGCGCA GATACTGACT TATGTGGCGG CAACAACGTC ATGTTCAGCA
GCCGAGCTTG AGCGACTCAA GCAACATGAG TTATCAGTGA TGGATAGAGA AAAGGCCAAC
CTTGCTGCGC TAAAATAA
 
Protein sequence
MSRVILVLGS PNDNQGRLSD IAISRCQAAL WQYQLRPDSK VLLTGGFGEH FNQTNTAHAL 
YCQAYLIDHG MPNSAFTDIA LSRFTFEDAI LSKPIVEEHG FRELCLVTSE FHLPRARLIF
SQIFAAQILT YVAATTSCSA AELERLKQHE LSVMDREKAN LAALK