| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3272 |
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| Symbol | |
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| ID | 5663660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4013808 |
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| End bp | 4015235 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237930 |
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| Product | citrate transporter |
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| Protein accession | YP_001503122 |
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| Protein GI | 157963088 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | [TIGR00775] Na+/H+ antiporter, NhaD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCA GTCAATTAAT TTTAGCCATA ATATCCTTAG GGCTAGCAAG CCCCGCCTTT
GCCAGCGAAG CTGGATTGGA TTTAACGCAA TCGGGTGTAG GTTATGCAGC GTTAATCATT
TTTTTTCTGG CTTATTGTTT AGTGATGGGA GAAGAGTATT TACAGCTGCG TAAATCAAAA
CCTGTACTGT TAGCGGCAGG TATTATCTGG CTGATGATAG GTTTTGCCTA TCAGCAACAA
GGCCAAGTTG AAGTGGCGAA ACAAGCCTTA GAACATAATT TACTGGAATA CTCTGAGCTA
TTGCTGTTCT TACTGGTGGC AATGACCTAT ATCAGTGCGA TGGAAGAAAG GCGCCTGTTT
GATAGTCTGC AGGCATGGAT GGTGAGTAAG GGGTTTAATT TTCGTACCTT ATTTTGGCTC
ACTGGCTTCC TATCTTTTAT CATTTCACCT ATTGCCGATA ACCTGACCAC GGCATTGTTA
ATGTGTGCAG TGGTAATGAA GGTCGGTGGC AGCAATGTAA AATTCATCAA TATTGCCTGT
ATCAACATCG TCGTAGCCGC GAATGCTGGC GGGGCCTTTA GTCCATTTGG CGATATTACC
ACCTTGATGG TCTGGCAAAC TGGCTTAGTG AGCTTTATGG AATTCACAGA TCTGTTTATT
CCATCGCTAG TTAACTACAT TATTCCAGCA ATCATTATGT CGTTCTTCGT ACCTAAGACT
AAGCCGGATT GCGCTAATGA ACAGGTCGAG TTAAAACGTG GCGCCAAACG GATTGTCGCG
CTATTTATTC TAACTATCGC CACCGCGGTT AGCTTCCACG CCTTAGTACA CTTCCCGCCA
GTTATCGGCA TGATGATGGG CCTAGGCTAC CTACAGTTCT TTGGTTTTTA CCTACGTAAA
ACGCTGCCTC GCTCACTAGA AAGAAAGAAA GCCGTTGCCT TAGCCAATAA AGATGAAGCA
GCACTAAAAC GCTTAGGTTC AGTGGTGCCA TTCGATGTAT TTAAACGCGT ATCCCATGCA
GAGTGGGACA CCTTACTGTT TTTCTACGGC GTGGTGATGT GCGTAGGCGG TTTAAGCTTA
CTAGGTTATC TCGGCATGGT ATCTGATGTG ATGTACAACC AGTGGGACCC GATTTGGGCT
AACGTAATGG TCGGCATACT CTCGGCAATT GTGGATAATA TTCCAGTGAT GTTTGCGGTA
CTGACCATGC AACCAGAGCT GAGCTTAGGC AACTGGTTAT TAGTAACATT AACTGCAGGT
GTCGGCGGAA GCATGTTATC AATAGGCTCA GCTGCTGGTG TAGCACTAAT GGGCGCAGCT
CACGGCAAAT ACACCTTCTT TGGCCATCTA AAGTGGATGC CGGTTATTGC ACTAGGTTAC
GCCGCAAGTA TCCTTTGTCA CCTATGGCTT AACGGCGACT TGTTTTAA
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| Protein sequence | MKVSQLILAI ISLGLASPAF ASEAGLDLTQ SGVGYAALII FFLAYCLVMG EEYLQLRKSK
PVLLAAGIIW LMIGFAYQQQ GQVEVAKQAL EHNLLEYSEL LLFLLVAMTY ISAMEERRLF
DSLQAWMVSK GFNFRTLFWL TGFLSFIISP IADNLTTALL MCAVVMKVGG SNVKFINIAC
INIVVAANAG GAFSPFGDIT TLMVWQTGLV SFMEFTDLFI PSLVNYIIPA IIMSFFVPKT
KPDCANEQVE LKRGAKRIVA LFILTIATAV SFHALVHFPP VIGMMMGLGY LQFFGFYLRK
TLPRSLERKK AVALANKDEA ALKRLGSVVP FDVFKRVSHA EWDTLLFFYG VVMCVGGLSL
LGYLGMVSDV MYNQWDPIWA NVMVGILSAI VDNIPVMFAV LTMQPELSLG NWLLVTLTAG
VGGSMLSIGS AAGVALMGAA HGKYTFFGHL KWMPVIALGY AASILCHLWL NGDLF
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