| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3267 |
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| Symbol | |
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| ID | 5663655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4008015 |
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| End bp | 4009160 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237925 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001503117 |
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| Protein GI | 157963083 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGCCA TAGGTCTAGC TTTGACTTTG TTCCAGTTTA ATCAAGGCCA GTTACAAGTT
TGGCAAGGGG TGATTGAGCA ACTTCCATAC TGGCTACTCC CTGCTTGCAT TGCGATAGCG
CTGCAATTTA ACCGTAGTCG ACTAGCTTAT CTTGCAGCAT TCATGCTGGC TTACTTTGTT
TGTACGACAA ACGATTGGTT GGGCACGATA GAGCAAGAGT ATGCCGAGCA GATCTTGCTT
GGCGGCACGT TCATTATGAC TTGGTTTGCT TTCATTAAAG ATAGGGGGCT CTTATCACCC
CATAGCTTAG TCAGGCTAAT GGGCATAATA GTTAGCTTCG CGGCGGCTTT TGGCTGGCTA
TGGCTGAACA CTGAATTTAA GCCGCTATTG GATCAATACC TGCCTGAACT GTTTAATGTG
GATGTGAGAA CATTAGCGCC TCTTTATCTG TGCATCTTTA TCGTAGCGAT ACGCGCAGCT
TGGCAGGCTA ACTTGGTTAA CACTTCTATA TTTATCAGCT TAGCCTTATG GACTGCACAA
TTTATTCGCC CAGAGACACT GCCGCTGGCG GTATCGATGA CGGCATTAGC TAGCATTTAC
ATTTTGACGG TTCTGACTGA CTCCTATTTT TTGGCCTATC GTGATGAGTT AACGGGCTTA
GCTTCACGCC GTGCCTTGTT TAACTTAGTG CTATCTTTAG GCCGTAAATA CAGTGTGGCT
ATGCTCGATA TCGATCATTT TAAGAAATTC AACGACACCT ATGGTCATGA TGTTGGTGAT
CAGGTGCTAA AGCTAGTTGC CAGTAAAATT GCAGGGGTTC GCGGTGGCGG AAGGGCCTTT
CGCTACGGGG GGGAAGAGTT CACCATCATC TTTCCTCGTA AAGACTCATC ATCGACGTTG
GATTATCTCG AAGAGGTGCG TGAGTCGATA GAGGAATACG ACATCGTGCT GCGAGATGAG
AAACGTAAGA GTCAGTCAAA AGCCACCCGG GGCAAGACAC AAGGTAAAGC TAAGACAGTG
AGTGTCACCA TCTCTATTGG TGTTGCAGAG CACCAAAACG GTGAAACTTT TGAGCAAACC
ATGAAGCGGT CCGATCAGGC ACTATATCGA GCCAAGAAAA AAGGGCGTAA TCAGGTTTGT
GTTTAA
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| Protein sequence | MIAIGLALTL FQFNQGQLQV WQGVIEQLPY WLLPACIAIA LQFNRSRLAY LAAFMLAYFV
CTTNDWLGTI EQEYAEQILL GGTFIMTWFA FIKDRGLLSP HSLVRLMGII VSFAAAFGWL
WLNTEFKPLL DQYLPELFNV DVRTLAPLYL CIFIVAIRAA WQANLVNTSI FISLALWTAQ
FIRPETLPLA VSMTALASIY ILTVLTDSYF LAYRDELTGL ASRRALFNLV LSLGRKYSVA
MLDIDHFKKF NDTYGHDVGD QVLKLVASKI AGVRGGGRAF RYGGEEFTII FPRKDSSSTL
DYLEEVRESI EEYDIVLRDE KRKSQSKATR GKTQGKAKTV SVTISIGVAE HQNGETFEQT
MKRSDQALYR AKKKGRNQVC V
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