Gene Spea_3252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3252 
Symbol 
ID5663641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3989316 
End bp3990227 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content48% 
IMG OID641237911 
Producthypothetical protein 
Protein accessionYP_001503103 
Protein GI157963069 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGGAG TGTTGTATCT ATTTATTGCC ACCTTGTTGG CTGCTGTGGG CTGGGTTGCC 
TCTAAAATTG TGGTGCAATC TGTGCCGGGG GAGTTATTTA TTGGCTCCCG CTTTCTATTG
GCAAGTTTAG TCTTGCTGCC ATTTTGCTAT AAGAGCCTGC TGAAACTCAG TATGAAACAG
TTGCTGTCGG CCTGTGGTGT TGGCGTCTTT CTCGGACTCG CACTGCAAGT TTGGATCTAT
GCGGTCTCGA TTAGTGACAG CTTGTCTGAG GGGGCGTTTA TCATGAGTTT GGCAATGATT
ATTGCACCGC TGACCGCTTG GATACTGTTC CAAGCTAAAC CTAATCGTGC CTTTTGGATA
GCCTTGCCTG TGAGTACGAC GGGCATGATG CTACTGAGCC TAACTAATGG CTGGAAGATG
GAGTCGAGTC AGTTGCTGTT CTTGCTGGCA TCGGCATTGC TTTCTGTACA TTTCGTGATG
AATAAGCGCA TCAGCGGTAA TCTAAAGCCA CTGGTTTCTA TCTGCTTACA GTTATTTGTG
GTCGGCTTAG TGGGCTTGGG CTATGCCTCG ATTACTCAGC CTCACAGCAT AGCGTTTTCT
GGAGAGCTAA TTAGTTGGTT TGCCATTTCG ACCCTGATTG CCACCTCTGT ACGTTACCTA
TTGCAGACTA TGGGGCAGTA TAAGGTGAGC ATGGAAACCG CAGCGCTATT GATGATCTTA
GAGCCTATTT GGACCCTGCT CTTGAGTATG ACTCTGTTGG GAGAGACGCT AGAGCCACAA
AAGCTTATTG GCGGCGGGGT GATCTTCTTG TCACTGTTTC TTTATATCAA ACTGTCTCGA
CGCTTTGCGA AGGCAGAGCA AGCAAAGGCG GTACAAGTAG AGACCGAACA AGCTGAGACG
GTAAAAGCAT AG
 
Protein sequence
MRGVLYLFIA TLLAAVGWVA SKIVVQSVPG ELFIGSRFLL ASLVLLPFCY KSLLKLSMKQ 
LLSACGVGVF LGLALQVWIY AVSISDSLSE GAFIMSLAMI IAPLTAWILF QAKPNRAFWI
ALPVSTTGMM LLSLTNGWKM ESSQLLFLLA SALLSVHFVM NKRISGNLKP LVSICLQLFV
VGLVGLGYAS ITQPHSIAFS GELISWFAIS TLIATSVRYL LQTMGQYKVS METAALLMIL
EPIWTLLLSM TLLGETLEPQ KLIGGGVIFL SLFLYIKLSR RFAKAEQAKA VQVETEQAET
VKA