| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3247 |
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| Symbol | |
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| ID | 5663636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3982544 |
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| End bp | 3984142 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237906 |
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| Product | BCCT transporter |
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| Protein accession | YP_001503098 |
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| Protein GI | 157963064 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCA AAAATCTCGA TCATAAGCTG TTTTGGCCTG CTATCTGCTT CACCTTTTTA
AGCTTGGCCT TGGCGGTATT TTTTCCTGAA AGCTCTAAAG AGGTCGCCCA TGCGGGCATG
AAGTGGGTGA CCAATGATAT TGGCTGGTTT ATCCAATTAG CCGGTTTTGG TGCACTTGTA
TTTTTGATGT GGATTGCTTT TAGTCGTTTT GGTCATATCA AGTTAGGTGA CGATAACGAT
GCTCCTGAGT TCACCTATGC CACTTATGCG TTTTTGATCT TTACTGCGGG TGTGGGCGCG
GCACTTATTT TTTGGGCCGT TGGCGAGCCT ATGTACTACA TGCAGAGCCC ACCTATGTTT
ACTGAGGCGG GCAGTGCTGA GGCTTCTCAG TGGCTTATTA CTTACACCTT GTTCCATTGG
GGACCGATAG GCTGGGCGAT CTTCTGTTTG CCTGCAGTTC CATATGCTTA TTACCTACAT
AAGAAAAAGA AACGTAACCT GCGTCTATCT AACTTACTTG AGGATGTGAT TGGTAAGAAA
AATGCCGATG GTCCACTTGG CTATTTCATC AACATTATCG CCATTTTCGG TACCCTAGGC
GCCTTCTCAA CTTCAATGGG CTTAGCCGTT GACCTTATCG GTTCGGGCAT TGAGAAAGTC
ACCGGTTTAC CAAATGATAT CTGGCTTCAG GTCGGTCTGA TTGTACTGTT TATTGTCTTC
TATGCCGTGG TGATGTTGGC CGGTATGAAG AAGGGCGTTG CTAAGCTTGC TAACTGGTGT
GTCTATGCCG CGTTCGCTTT AGGTATTTTC ATCTTATTGT CGGGGCCAAC CGCGTTTATT
CTGTCTTACT TCTTCGACAG CTTGAGCGTG ATGGTCGATA ACTTCGTGCG CATGAGTTTC
TGGAGCGATC CAGTTGAAAA GTCTGGTTTC CCACAGGCGT GGACCATGTA TTACTGGGCT
TGGTATTTTG CTTACCTAGT GATGATGGGC ATCTTCTTAG CGCGTATCTC TAAGGGACGT
ACGATTAAAG AGTTAGTGTT AACGACGATT TTCTTTGGCT CGGCAGGTTG TGCCTTCTTT
ATCGCTATCT TCGGCAGCTA CTCGGTATTT AGTGAGTTAA CGGGTGCACT ACCAGTGCTT
GAGTGGATGA ATGAGGCAGG GGTTTCCATG GCCGTGATTG AGGTGATCAA TGCGCTGCCT
TTTGGCGCGG CGATTTTGAT TATCTTCCTT ATCGTTGAAT TCTTCTTAAT GTCGACCACT
ATGACATCGG CTGCCGTGGC AATCTCGATG ATGACCACCA AAGAGTTGGA TGCGGATGCG
GATCCGGATG TTTCGGTAAG ATTGATTTGG GCATTAGGTA TTGGCGCGGT TTCAATGGCG
GCCTTCTTTA TGGGGGGCAG TATCGATACG ATTAAGTCCA TGTGTATTAT CGTTGGCTTG
CCGATGATTT TCCTAAATAT TTTGATGGTG GTGTGCTTGA TGAAGTGGAT TAGAAAGGAC
CACCCAGAAC TGTTCAAATC AACAGTTACA CAGGCTGCAA AAAACAACGC AGAACAGGCT
GAGCCTGCTC AAGCTGAATT AGCAAAAGTT GAGGGATAA
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| Protein sequence | MNFKNLDHKL FWPAICFTFL SLALAVFFPE SSKEVAHAGM KWVTNDIGWF IQLAGFGALV
FLMWIAFSRF GHIKLGDDND APEFTYATYA FLIFTAGVGA ALIFWAVGEP MYYMQSPPMF
TEAGSAEASQ WLITYTLFHW GPIGWAIFCL PAVPYAYYLH KKKKRNLRLS NLLEDVIGKK
NADGPLGYFI NIIAIFGTLG AFSTSMGLAV DLIGSGIEKV TGLPNDIWLQ VGLIVLFIVF
YAVVMLAGMK KGVAKLANWC VYAAFALGIF ILLSGPTAFI LSYFFDSLSV MVDNFVRMSF
WSDPVEKSGF PQAWTMYYWA WYFAYLVMMG IFLARISKGR TIKELVLTTI FFGSAGCAFF
IAIFGSYSVF SELTGALPVL EWMNEAGVSM AVIEVINALP FGAAILIIFL IVEFFLMSTT
MTSAAVAISM MTTKELDADA DPDVSVRLIW ALGIGAVSMA AFFMGGSIDT IKSMCIIVGL
PMIFLNILMV VCLMKWIRKD HPELFKSTVT QAAKNNAEQA EPAQAELAKV EG
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