| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3240 |
|---|
| Symbol | |
|---|
| ID | 5663629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 3975003 |
|---|
| End bp | 3975860 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641237899 |
|---|
| Product | putative glutathione S-transferase YghU |
|---|
| Protein accession | YP_001503091 |
|---|
| Protein GI | 157963057 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGC AATACACCCC CGCGAAAGTT TGGAGCATGG ATATCGAAAA TGGAGGCGAG
TGGGCCAGTA TTAACCGCCC CGACTCAGGT GCTAGGCATG AGCAAGCATT GCCAGCGGGG
AAACAGCCAC TGCAGCTGCA CTCTTTAGCT ACACCAAATG GCCAAAAGGT CACCATCATG
TTGGAAGAGT TGTTAGCTAA AGGCGTTAAA GCTGCTGAGT ATGACGCCTA TAAAATCAAT
ATTGGCGAGA GTGAGCAGTT CAGCTCAGGT TTTGTCGATA TTAATCCCAA CTCGAAAATA
CCTGCGCTAC TTGATACCTC AACGAATGAG CCTATACGTG TCTTTGAGTC AGGAAATATC
CTGCTGTATT TAGCCGAGAA GTTTGGTCAC TTTTTACCGA CCGAGCTAGC CGCTAAAACC
GAGGTGATGA ATTGGCTATT TTGGCTACAA GGCTCAGCCC CCTATCTTGG TGGCGGTTTC
GGCCATTTCT ATGCCTATGC ACCAGAAAAG TTTGAATACC CTATTAACCG TTTCGCTATG
GAAACCAAGC GCCAACTCGA TGTGCTCGAT AAGCAGCTTG CCAATAATCA GTTCATCGGC
GGCAGTGAAT ACAGTATCGC CGATATCGCA ATCTGGCCTT GGTATGGCAA CTTAGTCTTA
GGTAACTTGT ACGAAGCCGC TGAGTTTTTA GATGTCTCTA GCTACAAACA TCTACAGCGC
TGGGCAAAAC AGATAAGCGA GCGCGACGCC GTTAAGCGCG GCCGTATCGT TAACCGCTCA
TGGGGCGAGG AGTGGGAGCA ACTGAGGGAG CGCCACTGCG CCGAAGATAT CGATGCAGTG
CTAAACAAAA AGCCATAG
|
|---|
| Protein sequence | MTKQYTPAKV WSMDIENGGE WASINRPDSG ARHEQALPAG KQPLQLHSLA TPNGQKVTIM
LEELLAKGVK AAEYDAYKIN IGESEQFSSG FVDINPNSKI PALLDTSTNE PIRVFESGNI
LLYLAEKFGH FLPTELAAKT EVMNWLFWLQ GSAPYLGGGF GHFYAYAPEK FEYPINRFAM
ETKRQLDVLD KQLANNQFIG GSEYSIADIA IWPWYGNLVL GNLYEAAEFL DVSSYKHLQR
WAKQISERDA VKRGRIVNRS WGEEWEQLRE RHCAEDIDAV LNKKP
|
|---|
| |