| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3228 |
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| Symbol | |
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| ID | 5663617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3956915 |
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| End bp | 3957505 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237887 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001503079 |
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| Protein GI | 157963045 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGCTGG TTTTGTTTGA TTTTGATGGT ACCTTGACCC ATCAAGATAT GTTCACCAAA
TTTATTATCT ACTCAGCCAC GCCGGTACGA TTAGTGCTTG GCGTGATGTT TATGTCTCCC
CTTTATCTGT TGTACCGCTT AGGCTTGATC CCCGCGCGAA AGCTTAGGCC CTTGGTGAGT
TTTTTTGCCT TTGCTGGCCG CAATAAGCTT GCTGTCGATG TCATTGGGCG TGCTTATGCT
GACCAGGTTA TTTCTAAGCA TATTCGACTA GATGCAATGC AAACACTCAA ACAACATCAA
GATGATGGTG CCACCATTGT CTTGGTCTCA GCTTCGCTCG ATCTCTACCT TCGGCCTTGG
TGTCAGATGA TGAATATCCA GCTTATCTGT AGCGAAATGG CGAGTCAGGG CAAGCGTTAT
AGCGGTTATT ACAGCGCAGG AGATTGCAGC TGCAGCGCTA AGGCCTACAA GGTATCGCAG
CAGTTTGACT TAAGTGCTTT TAGCCAAATC TACGCCTATG GTGATACCAA AGAAGATCTT
GCCATGTTGG CACTGGCCGA CAAAGCTTTT ATGCAAGGCG TCGAGCAGTA A
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| Protein sequence | MKLVLFDFDG TLTHQDMFTK FIIYSATPVR LVLGVMFMSP LYLLYRLGLI PARKLRPLVS
FFAFAGRNKL AVDVIGRAYA DQVISKHIRL DAMQTLKQHQ DDGATIVLVS ASLDLYLRPW
CQMMNIQLIC SEMASQGKRY SGYYSAGDCS CSAKAYKVSQ QFDLSAFSQI YAYGDTKEDL
AMLALADKAF MQGVEQ
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